PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.NK24P
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 348aa    MW: 38721.5 Da    PI: 7.4994
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.NK24PgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.84.1e-21131180255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+W+AeIrdp     + +r++lg+f+tae Aa+a+++a+++++g
  Aradu.NK24P 131 KYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTFDTAEAAARAYDEAALRFRG 180
                  8********.**********93....36*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.6E-33130189IPR001471AP2/ERF domain
PROSITE profilePS5103225.857131188IPR001471AP2/ERF domain
CDDcd000182.10E-21131190No hitNo description
SuperFamilySSF541717.19E-23131189IPR016177DNA-binding domain
PfamPF008478.2E-15131180IPR001471AP2/ERF domain
SMARTSM003801.4E-37131194IPR001471AP2/ERF domain
PRINTSPR003678.3E-12132143IPR001471AP2/ERF domain
PRINTSPR003678.3E-12154170IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MRESSSSTKG RFWLYKVAGS DEFRKLKAVE DEEGGGSSSS HGCSSTVSEL EQLVSGTHAN  60
PQEQWWGHEQ QQSLGGASMM HHQHHHDDVS ASVLWGGHKR GRQEETNIHT AGTTSSESSA  120
SYEETGERKR KYRGVRQRPW GKWAAEIRDP QKAARVWLGT FDTAEAAARA YDEAALRFRG  180
NRAKLNFPEN VRAIPVPPQQ TTVVQESLVP VFRPVMQAPR SPLQFSSEQM MKDYCQYSEL  240
LKSSSDHFHG FDQWLYHSQM NLATQTSLLS STSLASSSLP TEFSQSTSQS SSASFPLLFS  300
SVQQQPGQQP GFFRPPRYYS DNTRGASGGL SFPPTSTWPD THGYPPPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-23130191163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.NK24P
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015942600.11e-140ethylene-responsive transcription factor ERF110
TrEMBLA0A444XUE21e-157A0A444XUE2_ARAHY; Uncharacterized protein
STRINGXP_010681129.14e-43(Beta vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49193253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.11e-21related to AP2 6