PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.LNW6E
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TALE
Protein Properties Length: 300aa    MW: 33236.7 Da    PI: 7.7459
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.LNW6EgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.46.4e-101151521954
                  HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                  Fe   ++yp+ +++  LA+++gL+ +qV++WF N R +
  Aradu.LNW6E 115 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 152
                  665559******************************87 PP
2BELL56.76.1e-191433072
         BELL 30 lqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
                 +q+v+ssFe+vagl+sa+pY+slAlk +S++F++Lk+ i++q+
  Aradu.LNW6E  1 MQMVVSSFETVAGLNSATPYVSLALKLVSKNFKSLKNSISGQL 43
                 9***************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF075262.0E-12140IPR006563POX domain
PROSITE profilePS5007111.95393156IPR001356Homeobox domain
CDDcd000861.63E-1296157No hitNo description
SMARTSM003892.1E-896160IPR001356Homeobox domain
SuperFamilySSF466891.58E-1798162IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.7E-2899160IPR009057Homeodomain-like
PfamPF059201.0E-18113152IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MQMVVSSFET VAGLNSATPY VSLALKLVSK NFKSLKNSIS GQLKLICQAL GEDYPTMPPA  60
PTSTSNRFES NMARLQRNKP GGGGGNMDFE PQQHVWRPQR GLPERAVAIL KSWLFEHFLH  120
PYPTDTDKHM LATQTGLSRN QVSNWFINAR VRVWKPMVEE IHMLETKGAN QISSNRMGEG  180
NSASNESSNH AKVLVDQPLA ISERQIRCLE MGSSSSSLAN DEEVQWSQEK RSKLECMDGT  240
LMGLMPFRGA GVGVGAEVRG LGPVSLTLEL RHGVEGSQQQ QQEEQLRHHF GGHMIHDFVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A2e-15102160563Homeobox protein Meis2
3k2a_B2e-15102160563Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.LNW6E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015952439.10.0BEL1-like homeodomain protein 8
TrEMBLA0A445E4Q30.0A0A445E4Q3_ARAHY; Uncharacterized protein
STRINGXP_007132286.11e-121(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34813257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.12e-66BEL1-like homeodomain 8