PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.LJT36
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family CAMTA
Protein Properties Length: 1085aa    MW: 121473 Da    PI: 5.8544
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.LJT36genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1142.71e-446816420118
         CG-1  20 nfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117
                  +f++h   l++      gsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYah+een++fqrr+yw+Le+++ +iv+vhyl+v
  Aradu.LJT36  68 KFSSHV--LNTCVVIAGGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEQDMMHIVFVHYLDV 163
                  555544..344555678*******************************************************************************98 PP

         CG-1 118 k 118
                  k
  Aradu.LJT36 164 K 164
                  5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143774.74216169IPR005559CG-1 DNA-binding domain
SMARTSM010767.7E-7019164IPR005559CG-1 DNA-binding domain
PfamPF038592.1E-52267IPR005559CG-1 DNA-binding domain
PfamPF038591.4E-3782163IPR005559CG-1 DNA-binding domain
PfamPF018334.4E-4524589IPR002909IPT domain
SuperFamilySSF812967.35E-9525590IPR014756Immunoglobulin E-set
PROSITE profilePS5029718.006688797IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.205.8E-18690798IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484032.64E-17694797IPR020683Ankyrin repeat-containing domain
CDDcd002042.09E-13694797No hitNo description
PfamPF127962.1E-6710793IPR020683Ankyrin repeat-containing domain
PROSITE profilePS500889.965738770IPR002110Ankyrin repeat
SMARTSM000150.11914936IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525405.31E-7914961IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS500968.059916944IPR000048IQ motif, EF-hand binding site
PfamPF006120.0017917935IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0054937959IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.029938963IPR000048IQ motif, EF-hand binding site
PfamPF006122.4E-4940959IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071275Biological Processcellular response to aluminum ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1085 aa     Download sequence    Send to blast
MAERSSSFGL GPRLDLQQLQ FEAQHRWLRP AEICEILRNY RMFHITSEPP NRPPSMVLKC  60
VAHKFIAKFS SHVLNTCVVI AGGSLFLFDR KVLRYFRKDG HNWRKKKDGK TVKEAHEKLK  120
VGSVDVLHCY YAHGEENENF QRRSYWMLEQ DMMHIVFVHY LDVKVNKTNI GRNIDTDEAM  180
SESQKGSSVL SGFPTSYNSM PSRSTDSMSP TSTLTSLCED ADSEDIRQAS SGMHSFGNSL  240
GSGQAMDSID TCSNRSYFML PISGDHGQST ISVTDYIPHV QGDTSRLGIT AYIEDQKSHV  300
MPLRDTITEQ SVGLYTPCSS ISSGSMGSTL EQEKAVPENL YGSKSGLNED SRGSQSTQSN  360
WQITFDENTG PLPRWSLTES LGLEFESDYS MALFGSETDN AIPEICPDLF TSNGELKEQP  420
VQQKFPKQST DAQSQHAPRS DSEYELPRED STGYSLNAKH ALLDGEENLK KVDSFSRWIT  480
KELGEVDDLH LQSSPGISWS TDECGHVIDD TSLNLSLSQD QLFSISDFSP KWAYADSEIE  540
VLIIGAFLKS QLEVEACHWS CMFGEVEVPA EVLTNGILCC QAPPHKVGRF REGFARNVDF  600
ADFFYSSTEM MLHLRLDELL SSKSVLSTNQ DFEGYMETRN LIFKLISLKE EEEYSHKEEA  660
TAGLSVSQHK LEEHVFHRKI KEKLYSWLLH KVTEGGKGPN VLDKDGQGVL HLVAALGYDW  720
AITPVITAGV NINFRDVNGW TALHWAASCG RERTVAVLVS MGAAAGALTD PSPAFPSGRT  780
AADLASSNGH KGISGFLGES LLTSHLASLT MDDPSEDGRN KTLGGKAVQT ASERSATPLL  840
YGDVSDTLCL KDSLSAVRNA TQAADRIHQV FRMQSFQRKQ LAQCEDDDEF GLSDQQVLSF  900
IASRACKSGQ GEGLVNAAAI QIQKKFRGWK KRKEFLIIRQ RVVKIQAHVR GHQVRKQYKL  960
IWSVGILEKV ILRWRRKGRG LRGFRPDTLN MVPNPPSNPS QEDDYDVLKE GRKQSEERFQ  1020
KALSRVKSMV QYPEARAQYR RVLNVVEDFR QTKEYTNSED TVDGVADLID IDMLLDDENL  1080
PIAYD
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in freezing tolerance in association with CAMTA1 and CAMTA3. Contributes together with CAMTA1 and CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:23581962). Involved together with CAMTA3 and CAMTA4 in the positive regulation of a general stress response (PubMed:25039701). Involved in tolerance to aluminum. Binds to the promoter of ALMT1 transporter and contributes to the positive regulation of aluminum-induced expression of ALMT1 (PubMed:25627216). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:23581962, ECO:0000269|PubMed:25039701, ECO:0000269|PubMed:25627216, ECO:0000305|PubMed:11925432}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00043PBMTransfer from AT5G64220Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.LJT36
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salt, wounding, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by aluminum (PubMed:25627216). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:25627216}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015957577.10.0LOW QUALITY PROTEIN: calmodulin-binding transcription activator 2
SwissprotQ6NPP40.0CMTA2_ARATH; Calmodulin-binding transcription activator 2
TrEMBLA0A444ZTX00.0A0A444ZTX0_ARAHY; Uncharacterized protein
STRINGGLYMA05G24430.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74062642
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]