PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.KPG0T | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | FAR1 | ||||||||
Protein Properties | Length: 114aa MW: 13305.5 Da PI: 10.088 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 25.2 | 5.3e-08 | 40 | 80 | 52 | 91 |
FAR1 52 rrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 t+++ +C a++ v+++k g+w ++k++l+H+H+++p Aradu.KPG0T 40 LITNPSAGLNCPARIYVHLMKdVGVWTISKVVLNHSHSCCP 80 457899999************99**************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 8.7E-6 | 39 | 80 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence Send to blast |
MIFETLEKTA KFYKHYSKLA DFSTKIRNMT WDGDKIKNQL ITNPSAGLNC PARIYVHLMK 60 DVGVWTISKV VLNHSHSCCP ERAEMLKKHR ELNMFVHRTI ETHEKAGIRP SKTY |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.KPG0T |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016177749.1 | 1e-60 | uncharacterized protein LOC107620038 | ||||
Refseq | XP_016195732.1 | 8e-60 | protein FAR1-RELATED SEQUENCE 5-like | ||||
TrEMBL | A0A444XKW5 | 5e-63 | A0A444XKW5_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF21 | 14 | 477 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 9e-06 | FAR1-related sequence 5 |