PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.JBN5K | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | GeBP | ||||||||
Protein Properties | Length: 199aa MW: 22043.1 Da PI: 10.1458 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 79.9 | 3.8e-25 | 47 | 143 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkks..isfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 lfqr++seeDei +L+Gl +f aktgk+p++ d+fy+f+k+s i ++vs q+ eKirrLKkKf++ k k+gk + k+h+ ++++l k +Wg Aradu.JBN5K 47 LFQRVFSEEDEIGILKGLSEFIAKTGKEPYKCADEFYDFMKGSnlIRANVSCMQVKEKIRRLKKKFENILIKEKNGKG-TTLKPHELEALQLGKNVWG 143 79**************************************9755599*************************888887.6789**************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 7.7E-24 | 48 | 143 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
MLKSQPSASV SQTKSGSKRA AENGIDHSEQ PKRVKKAQED AQKSKSLFQR VFSEEDEIGI 60 LKGLSEFIAK TGKEPYKCAD EFYDFMKGSN LIRANVSCMQ VKEKIRRLKK KFENILIKEK 120 NGKGTTLKPH ELEALQLGKN VWGHDGRGGE AVLKETAKKD TVNNEKAAKK ALVPHSKGKA 180 EAKSKLNSEP LDSNEDSEG |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.JBN5K |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015931658.1 | 1e-139 | probable transcription factor At1g61730 | ||||
Refseq | XP_015931774.1 | 1e-139 | probable transcription factor At1g61730 | ||||
TrEMBL | A0A445C6H3 | 1e-121 | A0A445C6H3_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1831 | 34 | 90 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 6e-23 | DNA-binding storekeeper protein-related transcriptional regulator |