PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.J5L1K
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 1129aa    MW: 126916 Da    PI: 6.8939
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.J5L1KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.11.5e-164794148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WTt Ed +lvd+v+++G g+W+++ r  g+ R++k+c++rw ++l
      Aradu.J5L1K 47 KGPWTTIEDAILVDYVTKHGEGNWNAVQRNTGLARCGKSCRLRWTNHL 94
                     79*******************************************996 PP
2Myb_DNA-binding48.32.3e-15100143146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +g++++eE++l+++ + q+G++ W++ a+ ++ gRt++++k++w++
      Aradu.J5L1K 100 KGAFSPEEEKLIIEFHSQFGNK-WARMAALLP-GRTDNEIKNYWNT 143
                      799*******************.*********.***********96 PP
3Myb_DNA-binding50.64.3e-16728775148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g+WT+ Ed +lvd+v+++G g+W+++ r   + R++k+c++rw ++l
      Aradu.J5L1K 728 KGPWTAAEDAILVDYVTKHGEGNWNAVQRNTKLARCGKSCRLRWANHL 775
                      79******************************************9986 PP
4Myb_DNA-binding50.74e-16781824146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +g++++eE++l++++++q+G++ W++ a+ ++ gRt++++k++w++
      Aradu.J5L1K 781 KGAFSPEEEKLIIELHAQFGNK-WARMAALLP-GRTDNEIKNYWNT 824
                      799*******************.*********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.0234294IPR017930Myb domain
SuperFamilySSF466891.39E-2845141IPR009057Homeodomain-like
SMARTSM007175.7E-134696IPR001005SANT/Myb domain
PfamPF002492.7E-134794IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.7E-2248101IPR009057Homeodomain-like
CDDcd001674.63E-104994No hitNo description
PROSITE profilePS5129423.96695149IPR017930Myb domain
SMARTSM007171.6E-1599147IPR001005SANT/Myb domain
PfamPF002492.9E-14100143IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.8E-24102148IPR009057Homeodomain-like
CDDcd001671.18E-10102143No hitNo description
PROSITE profilePS5129415.793723775IPR017930Myb domain
SuperFamilySSF466895.08E-29726822IPR009057Homeodomain-like
SMARTSM007173.4E-12727777IPR001005SANT/Myb domain
PfamPF002492.8E-13728775IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-22729782IPR009057Homeodomain-like
CDDcd001671.34E-9730775No hitNo description
PROSITE profilePS5129424.854776830IPR017930Myb domain
SMARTSM007172.7E-16780828IPR001005SANT/Myb domain
PfamPF002494.8E-15781824IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.9E-25783829IPR009057Homeodomain-like
CDDcd001672.53E-11783824No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0090406Cellular Componentpollen tube
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1129 aa     Download sequence    Send to blast
MENMNKDAEN DANSFTAMGK CVGDGGNNSG GEDGGGATAT GEVALKKGPW TTIEDAILVD  60
YVTKHGEGNW NAVQRNTGLA RCGKSCRLRW TNHLRPNLKK GAFSPEEEKL IIEFHSQFGN  120
KWARMAALLP GRTDNEIKNY WNTRVKRRQR QGLPLYSDDP NRSITTSTPT TNVTYVGENF  180
TNNAPITMFE FIKQSYPHSP SPRHHSPLTS PLQHRASSYS HMLSPLSSPA HSPLSSPATS  240
LPLSFTFQRP APLLYNPLSF KRYRSTPSCN PNTSPMMNNP THLSDIDNGF QFPMQLNSSS  300
FSHFFQNPTL LDLERSGSSL TSSPSNAQSK MQLLSNQIPL SLQTQQMEPL EVNYDIEYNN  360
DPNSLSASNR LFGDFLSETQ PSTSGHQILK KRNYLGLDER DNNVFDCCQS FDDSPLSSLY  420
GSSNPVLKQK EEATNLNQSM NEDLSTFLTV VPSIMQDQQN WQYNYSTEVS DNVQSSHVII  480
DDNFGFDIKP KPSLFPLSIA TNHNDNRGCY TWDNLSSQYN FGKELDSDEK SPTFNDKAKF  540
ENLKIEIDKV RVRVICKTED CLWVVYYACN TQDGSWPIKT LCNVYLNSTC ITKTLKATRK  600
IVEGDEIAQY GLVWDYAHEL LTRNLRSIVK ACEYFDKWPK DAWMKAYFSE PPKVDNICRN  660
SCESFNAKIK YERSNLILTL AKEVRRIIIK KNDANSFTAM RGSMEAGDGC CGDSGGATAA  720
GDEVALKKGP WTAAEDAILV DYVTKHGEGN WNAVQRNTKL ARCGKSCRLR WANHLRPNLK  780
KGAFSPEEEK LIIELHAQFG NKWARMAALL PGRTDNEIKN YWNTRVKRRQ RQGLPLYSDD  840
PDRPTISSTP TTPITHLGTN FINNSPTSKF EFLHHQSYLH SPSPHHHHHL NHSPLTSPLH  900
RAPPAPLLCN PLRFKRYRST STVNPTTPTT PTHLSDLDNG FRFPNPSLLD PERNMVCSTS  960
PSNFLSKIEL PSNQFSLSSQ PHQIEPSEFK LDDVEYNNDP NCLNTSNGLV GDILSEAQTM  1020
ASSHQNFKKR SYFGLNEGQD EAFEGCQSFD DSVLSSLYWS SSSGLKPKEE ATNLEKSMNE  1080
DLSTLLPVMP STLQCQQNWQ HNNTTEVSNN VQSSCLMTDD NFGLDIKPL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A5e-30458295107B-MYB
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.J5L1K
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015963709.20.0transcription factor MYB97-like
TrEMBLA0A445AP330.0A0A445AP33_ARAHY; Uncharacterized protein
STRINGXP_007146493.11e-135(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06100.12e-62myb domain protein 33