PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.IDI63
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 257aa    MW: 31011.1 Da    PI: 9.7238
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.IDI63genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.61.4e-10795194
                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
           B3  1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                 ffkvl +++   +    + k+f++++  g+   +   + le ++g + +vk   rk +++++l +GWk+ v+  +Lk   fv+Fk++g+s+fel v
  Aradu.IDI63  7 FFKVLRHPNLYDE--TKVTKSFVKKYwkGLA--N--PVLLELPTGDKIKVKW-SRKEDESIWLNDGWKRVVELLELKHQYFVIFKFKGDSKFELIV 95
                 7788855555544..4678*******85433..4..499*************.5888888********************************8865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.0E-14499IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.14E-134105IPR015300DNA-binding pseudobarrel domain
PfamPF023624.9E-8795IPR003340B3 DNA binding domain
SMARTSM010190.0079799IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MPYHNMFFKV LRHPNLYDET KVTKSFVKKY WKGLANPVLL ELPTGDKIKV KWSRKEDESI  60
WLNDGWKRVV ELLELKHQYF VIFKFKGDSK FELIVFDLSA MEIDYLSLRS IRNDHRQETN  120
RNHNDDEDDE DQSIEIVNEK QKQFRRRSRT ELQYMIIIFY LFVFTSCKIP YLIMHAILMN  180
FFYLRNSERA CSERLKRVQS DSKIAPKKDN KPLAVEFQSK KALMNRAQVF CLNSKYPCFI  240
LEMQRSYISH DLLILRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.IDI63
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029152502.15e-69B3 domain-containing protein REM6
TrEMBLA0A445B0W59e-58A0A445B0W5_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-12B3 family protein