PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.HBS6Q
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 584aa    MW: 66554.5 Da    PI: 8.958
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.HBS6QgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.83.5e-1733123199
                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  ffk++   d++ s +++lp kf  +   +   +k+++l d+sg++W+v+l  +  +++  +++GW++F +++gL+ gD++vF+++ +  f  +v++++
  Aradu.HBS6Q  33 FFKIM--FDSNFSTIMYLPDKFKPAVAAS--VNKKIILDDKSGERWKVTL--SEAGSHLAFKEGWNKFSSDHGLERGDILVFHHVTDVHF--YVTIYD 122
                  78888..555556679******8777544..3468***************..999999*************************8876666..999987 PP

                  S CS
           B3  99 k 99 
                  k
  Aradu.HBS6Q 123 K 123
                  6 PP

2B339.51e-125065732388
                  .HTT---..--SEEEEEETTS-EEEEEE....EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
           B3  23 aeehggkkeesktltledesgrsWevkliy..rkksgr...yvltkGWkeFvkangLkegDfvvFkldgrs 88 
                  ++++   k++ + ++l+d++ r W v +    +kk  +   ++l kGW++F +an+++ gD ++F+l+++ 
  Aradu.HBS6Q 506 CRNY---KNNRMVVILRDPQRRLWPVLYHDlhDKKMHGtkaFYLIKGWSQFYRANNVQPGDLCTFELKEEA 573
                  4444...345789***************445544443367899***********************98753 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.88E-2130126IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.9E-2030124IPR015300DNA-binding pseudobarrel domain
CDDcd100175.47E-1731122No hitNo description
PROSITE profilePS5086313.73331124IPR003340B3 DNA binding domain
SMARTSM010195.8E-1133124IPR003340B3 DNA binding domain
PfamPF023628.1E-1533123IPR003340B3 DNA binding domain
PROSITE profilePS5086310.743482584IPR003340B3 DNA binding domain
SMARTSM010192.6E-4484580IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.5E-13484581IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.73E-13487574IPR015300DNA-binding pseudobarrel domain
CDDcd100175.18E-13493581No hitNo description
PfamPF023621.6E-10499573IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 584 aa     Download sequence    Send to blast
MRPEALVCEE CACRCVLLHG NEKKKSSLFP PSFFKIMFDS NFSTIMYLPD KFKPAVAASV  60
NKKIILDDKS GERWKVTLSE AGSHLAFKEG WNKFSSDHGL ERGDILVFHH VTDVHFYVTI  120
YDKYACEKLC CSNTRNKTKR RRDSSVSPVR DVMLATPDQN ASVVSEPDAK KTNSQNKVVG  180
VGGTPNNVEN ISKHDKSNGS VKSTRMTENY DNTAKITARE SRVSPVNYKL CMNPVDAILC  240
DNSPSFEERF RGAAAFLSEA ELSGKRDSIR NTDRSRYDNT STCKLGERKE KNVLKREVRE  300
FQYTEDLEGD NKVAMSKKEH GFHIDGCLNT KPMFNATPNI SDATRLKSDP MATSKGKHGL  360
QIDGCPNTKH IVNNGIPRVS SAIQNGKILK KIKSEQADRN PSEECTFKDK VCAKGEMPKR  420
IKKEPRMDMT YNVSRFKDEF EARGIEVPKG LPKVIKKEFE KSSHKTEQND DNDDDSDNIQ  480
LAEVVRCVVP DHNDKFLELP TNLHQCRNYK NNRMVVILRD PQRRLWPVLY HDLHDKKMHG  540
TKAFYLIKGW SQFYRANNVQ PGDLCTFELK EEAKHIFNVD INHN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.HBS6Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015954503.10.0B3 domain-containing protein Os01g0905400-like isoform X1
RefseqXP_015954504.10.0B3 domain-containing protein Os01g0905400-like isoform X1
TrEMBLA0A445DWQ60.0A0A445DWQ6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF124762828
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.11e-10B3 family protein