PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.H8K0T
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 163aa    MW: 19119.1 Da    PI: 8.0598
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.H8K0TgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.94.9e-1562154198
                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE-SSSEE..EEEEE CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkldgrsefelvvkvf 97 
                  ffkv+     ++s  l lpk++++   +k++ + + +l++ +g  W+vk   +  ++++++ +GWkeFv++ng++ +  ++vF  dg+s+f   +k+f
  Aradu.H8K0T  62 FFKVF--LPQFSSEKLLLPKEHVALTRMKERVPEEFMLRNGRGGAWRVKT--SCIGEKVYFDDGWKEFVRDNGIQeACVIIVFNPDGSSTF--EFKIF 153
                  88999..77899999********88899999999****************..888888*****************4455679998887888..88887 PP

                  - CS
           B3  98 r 98 
                  +
  Aradu.H8K0T 154 E 154
                  6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.101.5E-1855158IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.35E-1657158IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.09760156IPR003340B3 DNA binding domain
CDDcd100175.27E-961153No hitNo description
SMARTSM010191.1E-862156IPR003340B3 DNA binding domain
PfamPF023625.9E-1362155IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
FKFLFFAKPQ QILLFFLSSF ASSTLKESTF VEIWTIFFSR QIKNFNIHFF DMMNTSAEQS  60
SFFKVFLPQF SSEKLLLPKE HVALTRMKER VPEEFMLRNG RGGAWRVKTS CIGEKVYFDD  120
GWKEFVRDNG IQEACVIIVF NPDGSSTFEF KIFESSMCEK TQT
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.H8K0T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025642221.11e-94B3 domain-containing protein REM20
TrEMBLA0A445A8V72e-93A0A445A8V7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF128521124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06160.23e-12B3 family protein