PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.G83RZ | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | G2-like | ||||||||
Protein Properties | Length: 572aa MW: 64212.6 Da PI: 5.9847 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 47.2 | 4.8e-15 | 168 | 204 | 1 | 37 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmk 37 k+r+rWtpeLHe+Fveav+qLGGse+A k++++ ++ Aradu.G83RZ 168 KQRMRWTPELHEAFVEAVNQLGGSERAPEKKLMDSIE 204 79****************************9998765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.0E-12 | 166 | 203 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.56E-5 | 166 | 202 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.5E-8 | 168 | 201 | IPR006447 | Myb domain, plants |
Pfam | PF14379 | 2.4E-20 | 217 | 259 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Pfam | PF04278 | 6.6E-10 | 333 | 386 | IPR007378 | Tic22-like |
Gene3D | G3DSA:3.40.850.10 | 7.3E-7 | 452 | 518 | IPR001752 | Kinesin motor domain |
Pfam | PF00225 | 2.4E-5 | 454 | 518 | IPR001752 | Kinesin motor domain |
SuperFamily | SSF52540 | 4.62E-5 | 456 | 524 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0007018 | Biological Process | microtubule-based movement | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003777 | Molecular Function | microtubule motor activity | ||||
GO:0005524 | Molecular Function | ATP binding | ||||
GO:0008017 | Molecular Function | microtubule binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 572 aa Download sequence Send to blast |
MSSSFPVLPT SAAQASSINS NIRSVGHMFS TPADFPDDGV PFPTASEIHA TTQASQPLRQ 60 IDDVSWGADL FDNILLFPDN NNAPFQNDHT VYSAPFSSSD NPKAVDFEWV DPFMSDDDPL 120 QLNWNQFVSD TNVAEPKPKE SQLSIQQQVP SVEANGLPDS VSTTPQTKQR MRWTPELHEA 180 FVEAVNQLGG SERAPEKKLM DSIEEMNPLD LKTSKGITEA LRLQMELQKR LHEQLEIQRK 240 LQIQIEDQGK RLQMMFEKQI EGSSSAPISS TGQHTNENSE PQNDDNDKQE QGDEQLVAPP 300 PKRLCSSRLW PRRRIKFLHD LPVYFLFLHD LLMYALSNPS EEFLLVVGAS TGKNLGLFCF 360 NEDDVHALLC QVSTIDPRLC DGSKVVLHST RMPKHLRSPL LMKPASRIHS RAVVAFFLRC 420 IGNVESLVKL LVDCILEAKE NIDGNFAASL HNENMDKTDD KLKIRSCNDD ELSLPYATLC 480 LVTSTADVLT LMKLSEVNRA VNSVALNNRN SRSHRLFNSV YSPCMFTEKI HRIHGSGSNR 540 ISLLEGKPVP YKKERDARTP PLTAARTSKR WL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.G83RZ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | JN201527 | 9e-54 | JN201527.1 Glycine max PHR2 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020986742.1 | 0.0 | LOW QUALITY PROTEIN: protein PHOSPHATE STARVATION RESPONSE 1 | ||||
TrEMBL | A0A445BJP8 | 0.0 | A0A445BJP8_ARAHY; Uncharacterized protein | ||||
STRING | XP_004495581.1 | 8e-99 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1512 | 34 | 98 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G29000.2 | 2e-40 | G2-like family protein |