PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.G837S
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 158aa    MW: 17883.6 Da    PI: 8.4692
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.G837SgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.46.2e-093175655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 +++ r RR++i ++ +eL +l+P       +K++ ae+L  A +Y+k+Lq
  Aradu.G837S 31 SIAARERRRKITEKTQELGKLVPGG-----PKMNTAEMLHAASRYVKYLQ 75
                 67889******************95.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.44E-122386IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.3352574IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.22E-72878No hitNo description
Gene3DG3DSA:4.10.280.101.3E-112983IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-93180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-63175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MVPEVVRNGF CVGINNESEK KDSERTISAQ SIAARERRRK ITEKTQELGK LVPGGPKMNT  60
AEMLHAASRY VKYLQTQVGM LQLMNTIQKE DEVAPPSEDL CALVTSPFVQ EKLYSEELCF  120
VPKDFVTTLT NQRDVRSKPT ILKDLKELIE TNNLQKKA
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.G837S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025608111.11e-112transcription factor bHLH52-like
TrEMBLA0A445CH411e-110A0A445CH41_ARAHY; Uncharacterized protein
STRINGGLYMA08G17747.13e-68(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34593065
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.15e-32bHLH family protein