PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.FB7GW

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Trihelix

Protein Properties

Length: 404aa MW: 44992.8 Da PI: 9.5138

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.FB7GW	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60	5.9e-19	74	164	1	81
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 rWt+qe l+Lie ++ +e+ + ++ + p+W+ vs+ +++rg++r+++qC+++w nl ++++kik++e + ++e++s + + Aradu.FB7GW 74 RWTRQESLVLIESKKLVESGEQINRyqsppgfvvlQTDPKWDMVSSLCQQRGVKRGAVQCRKRWGNLLTDFRKIKKWETNVKDENESFWMM 164 8************76666665444477888888*******************************************99888877765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.3E-4	71	143	IPR009057	Homeodomain-like
Pfam	PF13837	6.3E-10	73	164	No hit	No description
PROSITE profile	PS50090	6.47	74	141	IPR017877	Myb-like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence Send to blast
MVCILSQSTK NTRVRVIIIN AMESNSEKNI NISVGSSGGG SEHVPLVTVA KQPTTATETV 60 AKGETRAKAT RHPRWTRQES LVLIESKKLV ESGEQINRYQ SPPGFVVLQT DPKWDMVSSL 120 CQQRGVKRGA VQCRKRWGNL LTDFRKIKKW ETNVKDENES FWMMRNDKRK ENKLPGFFDS 180 VVYNVLDGGV CTAAAYPLTL IKGPPKQENI SGGGGDRGEG EGVVTASKKD HHRSRNQPHR 240 QNHDEVDEDD EMEDDETIVD SEMGWSTEEE NNTNSTTETG KVNNSSLMLL KTPTVAGAKE 300 TVMNMMMVMG STQKIPLPKL PTSGVSQEGH KKRRLSPGNS EHTTNFNNNI VRVLRRNNNM 360 LKAHLGAQNM NYQLAREHQK EQTDSLVAAL GKLTDALSKI ADKL

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence Send to blast

MVCILSQSTK NTRVRVIIIN AMESNSEKNI NISVGSSGGG SEHVPLVTVA KQPTTATETV  60
AKGETRAKAT RHPRWTRQES LVLIESKKLV ESGEQINRYQ SPPGFVVLQT DPKWDMVSSL  120
CQQRGVKRGA VQCRKRWGNL LTDFRKIKKW ETNVKDENES FWMMRNDKRK ENKLPGFFDS  180
VVYNVLDGGV CTAAAYPLTL IKGPPKQENI SGGGGDRGEG EGVVTASKKD HHRSRNQPHR  240
QNHDEVDEDD EMEDDETIVD SEMGWSTEEE NNTNSTTETG KVNNSSLMLL KTPTVAGAKE  300
TVMNMMMVMG STQKIPLPKL PTSGVSQEGH KKRRLSPGNS EHTTNFNNNI VRVLRRNNNM  360
LKAHLGAQNM NYQLAREHQK EQTDSLVAAL GKLTDALSKI ADKL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.FB7GW

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015955734.1	0.0	trihelix transcription factor ASR3-like isoform X2
TrEMBL	A0A444ZYB7	0.0	A0A444ZYB7_ARAHY; Uncharacterized protein
STRING	XP_004503841.1	1e-128	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2165	33	75

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	6e-45	Trihelix family protein