PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.E2TQA

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

SRS

Protein Properties

Length: 362aa MW: 39883.4 Da PI: 5.8443

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.E2TQA	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	26.3	2.1e-08	31	111	3	82
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathv..kstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskk 82 +++ +C++CGn a+ C +e C+ CC + C+ hv st +p + ++ + +++s + ++s+++++ + r+l s++ Aradu.E2TQA 31 QNKPKCKQCGNVARSRCPFESCKSCCSRNQNPCHIHVlkTSTTLPDKAPSSSATPIEQQSVEPSQSSTASRVASLRQL-SNS 111 56679********************************54477788776666655555555555555555555555554.333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05142	1.2E-5	35	108	IPR007818	Protein of unknown function DUF702

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence Send to blast
MAALSPAPNN NNQKAVSLSG GANPPKSQRG QNKPKCKQCG NVARSRCPFE SCKSCCSRNQ 60 NPCHIHVLKT STTLPDKAPS SSATPIEQQS VEPSQSSTAS RVASLRQLSN SFAQFNNLNI 120 SFRSRKPLTR KDAAAINEWR FSKLKEYKER NIELENETFD RYMQNIDLLE EVLAVKSMED 180 NVSSESESNA SSMEANNDLM ITKLKLQIRS NSVGSDAARM RMQQIVDRGL KKLKMSAVNG 240 AATEALSEDP NNTSGAAKSL RTERLSAISD LIDKINKARS EEDLKSCLEI KSQLFNMDGG 300 SSIVDPQPQD NETHGKEIDQ GDSTSGEELE YSLPKLVGTT DIDQETLNTI DNHFSSLEYL 360 EL

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence Send to blast

MAALSPAPNN NNQKAVSLSG GANPPKSQRG QNKPKCKQCG NVARSRCPFE SCKSCCSRNQ  60
NPCHIHVLKT STTLPDKAPS SSATPIEQQS VEPSQSSTAS RVASLRQLSN SFAQFNNLNI  120
SFRSRKPLTR KDAAAINEWR FSKLKEYKER NIELENETFD RYMQNIDLLE EVLAVKSMED  180
NVSSESESNA SSMEANNDLM ITKLKLQIRS NSVGSDAARM RMQQIVDRGL KKLKMSAVNG  240
AATEALSEDP NNTSGAAKSL RTERLSAISD LIDKINKARS EEDLKSCLEI KSQLFNMDGG  300
SSIVDPQPQD NETHGKEIDQ GDSTSGEELE YSLPKLVGTT DIDQETLNTI DNHFSSLEYL  360
EL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.E2TQA

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015963670.1	0.0	uncharacterized protein LOC107487527 isoform X2
Refseq	XP_025651855.1	0.0	uncharacterized protein LOC112747863 isoform X2
Refseq	XP_025698435.1	0.0	uncharacterized protein LOC112800393 isoform X2
TrEMBL	A0A444WUF3	0.0	A0A444WUF3_ARAHY; Uncharacterized protein
STRING	GLYMA17G16100.1	1e-166	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7690	16	18

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32730.1	2e-88