PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.D69WY

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

STAT

Protein Properties

Length: 740aa MW: 82911 Da PI: 6.1605

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.D69WY	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	170.9	2.2e-53	246	379	1	122
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkis............qLsskcdnrLfrik 86 ldvvll+ +gqpv+k+ ev asLlyad+ ++ve++ d+eap+L+sydG+ef+s++rp+kll Grasfklkis qLsskcdnrLf ik Aradu.D69WY 246 LDVVLLDVFGQPVDKENEVYASLLYADTRAPVENTIDEEAPILASYDGIEFPSYERPSKLLLGRASFKLKISqfgtitnyvsicQLSSKCDNRLFLIK 343 8*******************************************************************9944444444444459******** PP STAT 87 feipklkkypfleavskpirCisrsrntrsssltkk 122 f++pkl +ypf+ea+s+pirCisrsrntr s+l++k Aradu.D69WY 344 FCVPKLGNYPFFEALSRPIRCISRSRNTRLSTLVWK 379 ***************************9999886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF49899	7.04E-8	54	198	IPR013320	Concanavalin A-like lectin/glucanase domain
Gene3D	G3DSA:3.30.505.10	7.0E-7	641	712	IPR000980	SH2 domain
SuperFamily	SSF55550	1.23E-8	643	723	IPR000980	SH2 domain
PROSITE profile	PS50001	9.455	649	740	IPR000980	SH2 domain

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence Send to blast
MPSLGYSNFE RTATSKKRAK TKKEEIMFTD AIGNAGYSLL KDLRAEIEVK DGIFSLCFWV 60 YLANSTTFPA TIIQQVCSDV SESAPFLVIN DHKRINLLPL LLLHEEAPDT GNINSLTEVA 120 YATVDFEFPL QNWVHIGCEV CPNHMKLQIN GEIVGEKPLS SNKEPSSNDL RKIVLANIGG 180 DGNISHGYVY NFQVFPSVSS IKDHHMKDPP LKLSIDESSA SEIEEESDGV WSIVGGKASC 240 RRNFSLDVVL LDVFGQPVDK ENEVYASLLY ADTRAPVENT IDEEAPILAS YDGIEFPSYE 300 RPSKLLLGRA SFKLKISQFG TITNYVSICQ LSSKCDNRLF LIKFCVPKLG NYPFFEALSR 360 PIRCISRSRN TRLSTLVWKR SPGLAKHNLM QSSGMDDASF EHQHPVCEAK SNPLTKRFRF 420 GHDKISVSVK ADTNVEQPDE ECNSHARTTN QVENGLTTGL YGTPANYEAY ETLSDSESIG 480 ERNSPSNNVA SRRYPISDMT VFKYCLAGLA ERSLMLKEIA SLASKKEISE LAHHVSLYSG 540 CSHHGNQILI AKKLVEDGTN LWKVMSPNNN HVPWESAVYE IEEQFMKIAS CSSRSLSHQD 600 LELLRVIAGC QEYLAQENFE KLWCWLYPVA YIISKERINP IWNSTSPKWI EGFITKEEAE 660 ASLQGPTGLQ EPGTFVLRFP TSRSWPHPDA GSLIVTYVGN DYKLHHRLLS VDRDNKRPLG 720 SVELCRIPFT TQLSSFEGCL

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence Send to blast

MPSLGYSNFE RTATSKKRAK TKKEEIMFTD AIGNAGYSLL KDLRAEIEVK DGIFSLCFWV  60
YLANSTTFPA TIIQQVCSDV SESAPFLVIN DHKRINLLPL LLLHEEAPDT GNINSLTEVA  120
YATVDFEFPL QNWVHIGCEV CPNHMKLQIN GEIVGEKPLS SNKEPSSNDL RKIVLANIGG  180
DGNISHGYVY NFQVFPSVSS IKDHHMKDPP LKLSIDESSA SEIEEESDGV WSIVGGKASC  240
RRNFSLDVVL LDVFGQPVDK ENEVYASLLY ADTRAPVENT IDEEAPILAS YDGIEFPSYE  300
RPSKLLLGRA SFKLKISQFG TITNYVSICQ LSSKCDNRLF LIKFCVPKLG NYPFFEALSR  360
PIRCISRSRN TRLSTLVWKR SPGLAKHNLM QSSGMDDASF EHQHPVCEAK SNPLTKRFRF  420
GHDKISVSVK ADTNVEQPDE ECNSHARTTN QVENGLTTGL YGTPANYEAY ETLSDSESIG  480
ERNSPSNNVA SRRYPISDMT VFKYCLAGLA ERSLMLKEIA SLASKKEISE LAHHVSLYSG  540
CSHHGNQILI AKKLVEDGTN LWKVMSPNNN HVPWESAVYE IEEQFMKIAS CSSRSLSHQD  600
LELLRVIAGC QEYLAQENFE KLWCWLYPVA YIISKERINP IWNSTSPKWI EGFITKEEAE  660
ASLQGPTGLQ EPGTFVLRFP TSRSWPHPDA GSLIVTYVGN DYKLHHRLLS VDRDNKRPLG  720
SVELCRIPFT TQLSSFEGCL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.D69WY

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015958463.1	0.0	uncharacterized protein LOC107482472 isoform X2
TrEMBL	A0A151R0T3	0.0	A0A151R0T3_CAJCA; Uncharacterized protein
STRING	XP_004513787.1	0.0	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6710	30	36

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	0.0	SH2 domain protein B