PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.D3UE4
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 301aa    MW: 32961.1 Da    PI: 8.6127
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.D3UE4genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.4e-10234287655
                  HHHHHHHHHHHHHHHHHHHCTSCC.C......TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPk.as...kapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri  ++ +L+el+P+ +    ++ ++  s a++L +Av++Ik Lq
  Aradu.D3UE4 234 SIAERERRTRISGKLKKLQELVPNmDKympHTMKPQTSYADMLDLAVQHIKGLQ 287
                  689*********************888**9999999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.198228286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-11231294IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.54E-10232291No hitNo description
SMARTSM003531.4E-9234292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-8234287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.3E-10234290IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010629Biological Processnegative regulation of gene expression
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MYQPSSSSSS SSQAHNSTVS EPALTRYGSA PGSLLRTAVD AVIAGGAGGP RHPHPLMPTG  60
SHYFSGESSE STSKVNDSSK DHNLXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXRSSP  120
AGFLSHLADN AGTEKVSESV VVDASTSERA YAMDHCWDNS NSNSSSIVFS APPSKRSKNI  180
DGDILNCLTA LDSQYSLPQT ALEMATMEKL MHIPEDSVPC KIRAKRGCAT HPRSIAERER  240
RTRISGKLKK LQELVPNMDK YMPHTMKPQT SYADMLDLAV QHIKGLQTQV QVRKNILVFT  300
V
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.D3UE4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029144903.11e-149transcription factor bHLH128
TrEMBLA0A444XUN91e-146A0A444XUN9_ARAHY; Uncharacterized protein
TrEMBLA0A445BDJ61e-140A0A445BDJ6_ARAHY; Uncharacterized protein
STRINGXP_008380690.14e-83(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76803140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43140.13e-55bHLH family protein