PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.CYN81

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 842aa MW: 96785.9 Da PI: 9.6251

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.CYN81	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.7	1.9e-13	748	818	23	91
FAR1 23 krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 + ng+i +r++vC+k g+r+ ++ k ++++r+ r+ tr++Cka+++ +++ +gkw+v+ +e+e nH+l+p Aradu.CYN81 748 DANGNINTRQLVCNKVGERHWKHLKkDNRQRELRTITRVNCKARIHFIRHYrSGKWKVSVFESEYNHPLCP 818 67999***********998765536888889*********888877***************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00077	9.5E-6	121	199	IPR018061	Retropepsins
CDD	cd00303	2.02E-6	134	212	No hit	No description
SuperFamily	SSF56672	8.9E-16	313	481	No hit	No description
Gene3D	G3DSA:3.10.10.10	6.2E-4	315	360	No hit	No description
CDD	cd09274	6.24E-27	373	489	No hit	No description
Pfam	PF03101	5.8E-12	748	818	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 842 aa Download sequence Send to blast
MRKVFKRTSK SIPKKTPLFA IHVKNQDMLA NTVVFLPITI QDLHTELNNL KREIQEVKRN 60 QDNHQLILSQ LMQEEESDDG ELDPLINQTE FSEKQENKIS NDNDGKEILR IINIFSFMKC 120 RVNIRIVVKD FVLETIALFD SGADSNCIKE GLIPTKYFEK TTERLSSITG ERINIRFKLT 180 DTFVEKGNLR IPTNFIIAKD IKNDVVLGIP FIILLFPYLA DFPGITSFVG EQVTFFEFLD 240 SPTQKSLNLI ESKTKQICFL KEEISFKTLE SQLSQPRIQN KIKNLSNQIE KSIYSDFPRA 300 FWKRKEHIVD LPYEKARPIQ MNEQLLQHCQ KEIKDILDKG LIHPSKIPWS CSAFYVNKQA 360 EIEQETPRLL YNASDIGYGS ILKQNLHDKE CIIAFTSKHW NSTQQIYSTV KKEILSIVLC 420 ITKFQSDLLN QKFLVRVDCK SAKEVLQKDV KNLASKNFFA RWQAILSVFD FDIEHINGNS 480 NSLPNFLTRE YLETSKDTMP KKATLASIRG RGVRLALPGP TKKSGSSTPT GSSTQQPTPI 540 IQDPTKSSTQ ITKNIVELSS QPPSLSKLHK KSWADLCDSS DDDEIDQAKL LSQPKKTICN 600 DPNGKTITQA KQPQSLQTQP LNTQPKQHFT YISKNKFSSV ISKVFPPGFH FRPTTINKTR 660 QFYEFILVDS DSVSIKHYKD PKDTANITHS TIQILKVLTP TQFGKNPNST KKYFYLNVLY 720 SCFQKKELME NDGKESSDES DDMMDTVDAN GNINTRQLVC NKVGERHWKH LKKDNRQREL 780 RTITRVNCKA RIHFIRHYRS GKWKVSVFES EYNHPLCPPK YKHLIAANRG LSDIDKTQAD 840 SL

Sequence ? help Back to Top

Protein Sequence Length: 842 aa Download sequence Send to blast

MRKVFKRTSK SIPKKTPLFA IHVKNQDMLA NTVVFLPITI QDLHTELNNL KREIQEVKRN  60
QDNHQLILSQ LMQEEESDDG ELDPLINQTE FSEKQENKIS NDNDGKEILR IINIFSFMKC  120
RVNIRIVVKD FVLETIALFD SGADSNCIKE GLIPTKYFEK TTERLSSITG ERINIRFKLT  180
DTFVEKGNLR IPTNFIIAKD IKNDVVLGIP FIILLFPYLA DFPGITSFVG EQVTFFEFLD  240
SPTQKSLNLI ESKTKQICFL KEEISFKTLE SQLSQPRIQN KIKNLSNQIE KSIYSDFPRA  300
FWKRKEHIVD LPYEKARPIQ MNEQLLQHCQ KEIKDILDKG LIHPSKIPWS CSAFYVNKQA  360
EIEQETPRLL YNASDIGYGS ILKQNLHDKE CIIAFTSKHW NSTQQIYSTV KKEILSIVLC  420
ITKFQSDLLN QKFLVRVDCK SAKEVLQKDV KNLASKNFFA RWQAILSVFD FDIEHINGNS  480
NSLPNFLTRE YLETSKDTMP KKATLASIRG RGVRLALPGP TKKSGSSTPT GSSTQQPTPI  540
IQDPTKSSTQ ITKNIVELSS QPPSLSKLHK KSWADLCDSS DDDEIDQAKL LSQPKKTICN  600
DPNGKTITQA KQPQSLQTQP LNTQPKQHFT YISKNKFSSV ISKVFPPGFH FRPTTINKTR  660
QFYEFILVDS DSVSIKHYKD PKDTANITHS TIQILKVLTP TQFGKNPNST KKYFYLNVLY  720
SCFQKKELME NDGKESSDES DDMMDTVDAN GNINTRQLVC NKVGERHWKH LKKDNRQREL  780
RTITRVNCKA RIHFIRHYRS GKWKVSVFES EYNHPLCPPK YKHLIAANRG LSDIDKTQAD  840
SL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.CYN81

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-12	FAR1-related sequence 5