PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.C5HAC
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family AP2
Protein Properties Length: 509aa    MW: 56343.1 Da    PI: 6.7623
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.C5HACgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.53.2e-08258299137
          AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfg 37 
                  s+y+GV++++++gr++A+++d  +   g  ++ ++++lgk+ 
  Aradu.C5HAC 258 SQYRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGKHH 299
                  78*******************654454478446*******96 PP
2AP233.21.3e-10298341955
          AP2   9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Aradu.C5HAC 298 HHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 341
                  6789******988532...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.00E-22258351No hitNo description
Gene3DG3DSA:3.30.730.101.3E-14259281IPR001471AP2/ERF domain
SMARTSM003801.1E-30259355IPR001471AP2/ERF domain
PROSITE profilePS5103218.61259349IPR001471AP2/ERF domain
PRINTSPR003671.1E-6260271IPR001471AP2/ERF domain
PfamPF008472.2E-5298341IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-14299351IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-14313349IPR001471AP2/ERF domain
PRINTSPR003671.1E-6331351IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    Send to blast
MSNWLGFSLT PHLRIDEEFE RQNEERGNGG SYPPPVMPLR SDGSLCVADS FSRSAAPHEW  60
RYENAMGSGN SNEEGPKLED FLGCYSNPSP LAETKAFCQQ NRNQNQQNNF SKMNMNVETS  120
SSLFQSFNPY NDSRSNHNHH HHHALIAGNG VYKSSWLAQT CCSSSSSAEA NQNSSSNNNN  180
NNGGCNFQSL SLTMSPSSVQ QQEQNGGVVV VSGMNHQVVL HNQHNQVDDD TRKRSIAKSQ  240
GREPVPRKSI DTFGQRTSQY RGVTRHRWTG RYEAHLWDNS CRKEGQTRKG RQVYLGKHHQ  300
HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR GTSAVTNFDI SRYDVKRICS  360
SSTLIAGDLA KRSPKDSALA TAEDFNSSGS AATPSQPTPL AITDGEQHSD ELSNMVWNGN  420
SDEQQQNESG TINRNVAGPL SQQVSPSNKN EANPPQSPNE FGVNGTDYGH GYFTLHGPPK  480
YDDGNNENEH RIGNLGLVNQ VPMFALWNE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.C5HAC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015939251.10.0AP2-like ethylene-responsive transcription factor AIL1
TrEMBLA0A444XGB30.0A0A444XGB3_ARAHY; Uncharacterized protein
STRINGGLYMA16G00950.21e-175(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF102743137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.12e-37AP2 family protein