PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.BPK98
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 463aa    MW: 52501.4 Da    PI: 6.1297
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.BPK98genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM148.14.4e-4611265128
          NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                  +rF+Ptdeelv++yL++k+ ++++++ ++i+++d++kvePw++p  +k+k+++ ew+fFs rd ky ++kr+nratk gyWkatg+d+ ++++ ++++
  Aradu.BPK98   1 MRFKPTDEELVSYYLNHKLLNDNFPI-NIIPDIDLCKVEPWQIPalSKIKSDDPEWFFFSGRDYKYGKSKRSNRATKGGYWKATGQDRYIKERgTTNV 97 
                  69************************.89***************5449999999**************************************966778 PP

          NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                  +g kktLvfy+gr p+g+kt+Wv+hey++
  Aradu.BPK98  98 IGSKKTLVFYSGRVPNGVKTNWVIHEYHA 126
                  ***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.97E-501144IPR003441NAC domain
PfamPF023651.6E-231125IPR003441NAC domain
PROSITE profilePS5100551.051144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
MRFKPTDEEL VSYYLNHKLL NDNFPINIIP DIDLCKVEPW QIPALSKIKS DDPEWFFFSG  60
RDYKYGKSKR SNRATKGGYW KATGQDRYIK ERGTTNVIGS KKTLVFYSGR VPNGVKTNWV  120
IHEYHATTFD DSQRNFVLCR LMKKAERKSE DGTDAQACDE GEPSTHMEEA DESVPSMFES  180
PDVDMGSIFH TLPQDGSSSQ HSPVSIEQQE SFPFSPSENY YLVNEDRSMH IQFETNEEKQ  240
DAEKFADSIL DGGNIAMFEE RQQHHTFMNN HLRSVPSMRV CYESSDTDAE VVSRRAGSRE  300
YHVSKMVQSS HGAACTDKTR SISSEDFWGL DSSSCDSNAD KPFEINSIEI SSPPSALSRS  360
KNQYIPRLSQ THRKVSSNAI PHLEDKKKLT TVEQSRRDQE KAQKTSPGKK LETRSSDVNR  420
IGSFIHLEPC SSSESLTPRA VYLVNVVIGI LLLLAISWDV LSC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-35114419168Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.BPK98
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015948138.10.0NAC domain-containing protein 62
TrEMBLA0A445EHJ80.0A0A445EHJ8_ARAHY; Uncharacterized protein
STRINGGLYMA07G05351.11e-138(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.11e-45NAC transcription factor-like 9