PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.B5WG1
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 316aa    MW: 34974.7 Da    PI: 4.5864
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.B5WG1genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.69e-08184228655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++ +r+RR+ri + +  L +llP++        s a iL   ++++k+Lq
  Aradu.B5WG1 184 KASDRQRRQRIADNLKALHDLLPNQ-----AEGSQAYILDDIIDHVKYLQ 228
                  7889********************6.....479****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.325178227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.94E-7179232No hitNo description
Gene3DG3DSA:4.10.280.101.7E-9183241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-10183242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-5184233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.4E-5184228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MESKMSFTSG GTSCHVTGSA AEDDSNMQDA VATEEGSGSQ WSFLPKPSHH NYVQYLTESS  60
NYLPKTEDMI GSNYAALGFG NDANGTNMNF FCNDPGKAYA FKTEVHSSNE VDIGKQVGYW  120
RPAESEVQQE AMQFESTQHH HPLYPESPAS WTPEATGDNP NVSRLDPSVM AGTPSFLPKP  180
ARQKASDRQR RQRIADNLKA LHDLLPNQAE GSQAYILDDI IDHVKYLQLQ LKELSGSRLQ  240
AESTAIPLVF HEGYGHYIDQ QKLNEPLEEM MGKLLEENPA SASQLLENNG LVLLPMELVQ  300
DLHQSMQIFG NSNALV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181190RQKASDRQRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.B5WG1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020982236.10.0transcription factor bHLH7-like isoform X2
TrEMBLA0A445CKV10.0A0A445CKV1_ARAHY; Uncharacterized protein
STRINGXP_007144615.11e-111(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF121642426
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30980.11e-20LJRHL1-like 2