PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.B11G2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | B3 | ||||||||
Protein Properties | Length: 123aa MW: 14289.3 Da PI: 7.5954 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31 | 4.4e-10 | 53 | 120 | 17 | 88 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 +pk+f ++g +++ + l+ ++g W++ + ++g++ +++GWkeF++ L+ g ++ F+++++s Aradu.B11G2 53 KFPKEFSMKYGDGVPNP--VYLKPPDGTAWKIDW--SEYDGAIQFENGWKEFASYYSLDHGHMMWFEYNKTS 120 68*****9**5554565..***************..*******************************98764 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 4.5E-13 | 35 | 121 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 6.28E-14 | 36 | 120 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 11.335 | 37 | 123 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence Send to blast |
MASSSFQRNK HSPSSVICFF KIVLRQSLED GNLVSSFMLI TKTSFILSFE LQKFPKEFSM 60 KYGDGVPNPV YLKPPDGTAW KIDWSEYDGA IQFENGWKEF ASYYSLDHGH MMWFEYNKTS 120 KTL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.B11G2 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020987974.1 | 8e-70 | B3 domain-containing protein At3g18960-like | ||||
TrEMBL | A0A445BPE2 | 7e-86 | A0A445BPE2_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF98 | 34 | 369 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 3e-10 | B3 family protein |