PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.9V0KU
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 338aa    MW: 40358.2 Da    PI: 9.0076
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.9V0KUgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR137.96e-121197191
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                 kfY++Y+k + Fs +++++++    ++i+++  vC++e + +++ +    + +t+++   +C  ++ v  +k  g w ++k++l+H+H+ +p
  Aradu.9V0KU 11 KFYKHYSKLASFSSKIRNTTHD--RDKIKNQLIVCTREERWKSKISP---TLKTNPSAGLNCLTRIYVYIMKdVGLWTISKVVLNHSHPYCP 97
                 6****************98887..5569**********998887766...999****************99989**************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.6E-91197IPR004330FAR1 DNA binding domain
PROSITE profilePS509668.704229273IPR007527Zinc finger, SWIM-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MIFKTLEEAG KFYKHYSKLA SFSSKIRNTT HDRDKIKNQL IVCTREERWK SKISPTLKTN  60
PSAGLNCLTR IYVYIMKDVG LWTISKVVLN HSHPYCPDKA EMLKQHRELS MFMRRTIETH  120
EELYEDRYIW ISIYLDHYFW VEMRSTQRSE SMHSFFNKFI TQNSSLRQFV KQYDNCLTSR  180
EKVERELDAA DFHIHVYTHE KFREVQAQFR GKVNCITRSM HSTLGFTTYE VIEQVSNSTL  240
NKFVVTYDAC HCLLFESRGI LCRHSLSVLS FEQVDNVAPK YILERWSKNI KRRHTHIKSS  300
QDEPLLELRS KRFDKLVFWS QNICEFAFES EELTGILH
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.9V0KU
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015960283.11e-134protein FAR1-RELATED SEQUENCE 6-like
TrEMBLA0A444YSY61e-179A0A444YSY6_ARAHY; Uncharacterized protein
TrEMBLA0A445B3W81e-178A0A445B3W8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.21e-25far-red elongated hypocotyls 3