PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.9K9IH | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bHLH | ||||||||
Protein Properties | Length: 256aa MW: 29348.5 Da PI: 6.7936 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.2 | 6.3e-13 | 54 | 103 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +hn++Er RR++iN ++ Lr++lP a + kK+s ++ ++ +YI +Lq Aradu.9K9IH 54 NHNANERHRRKKINALYSSLRSILPVA--DQTKKMSIPATISRVLKYIPELQ 103 8*************************6..48888***************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.31E-15 | 50 | 120 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 13.452 | 50 | 102 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.56E-10 | 51 | 107 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.1E-11 | 52 | 116 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.9E-10 | 54 | 103 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.5E-10 | 56 | 108 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010106 | Biological Process | cellular response to iron ion starvation | ||||
GO:0055072 | Biological Process | iron ion homeostasis | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence Send to blast |
MSMMLALSSP TSMFPNNMEW PLELEEEELS HSHHEYFNSE EYPLLSSSMA KKFNHNANER 60 HRRKKINALY SSLRSILPVA DQTKKMSIPA TISRVLKYIP ELQQQVEELI KKKEELLLRI 120 SRQGDINNDD AAAAAAMNKK GHHHQNSSGF LVSSSTISDS EVSIQIISSY GIQKCQVSEI 180 LVCLENHYAL QLLNASSFDT FGGRLFYNLH FQMEMAHTLD TEVLSEKILS ICEKHQRIYL 240 CNVNNTYKYF LFLVIA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.9K9IH |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015969203.1 | 1e-176 | transcription factor bHLH100 | ||||
TrEMBL | A0A445CLU9 | 1e-172 | A0A445CLU9_ARAHY; Uncharacterized protein | ||||
STRING | XP_004513200.1 | 2e-64 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2402 | 33 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41240.1 | 1e-26 | basic helix-loop-helix protein 100 |