PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.9H0MY
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 705aa    MW: 77008.7 Da    PI: 6.2372
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.9H0MYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.74.3e-2588210187
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......................................rergferspkqCkekwenlnkr 60 
                  rW++qe+laL+++r++m+ ++r+++ k+plWeevs++                                       +e g++r++k+Ckek+en+ k+
  Aradu.9H0MY  88 RWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSSYSlisnvvygyslsyasipsilalvnlgglilmnelirklAELGYKRNAKKCKEKFENVYKY 185
                  8************************************************************************************************* PP

     trihelix  61 ykkikegekkrtsessstcpyfdqlea 87 
                  +k++k+g++++++++  t+++fdqlea
  Aradu.9H0MY 186 HKRTKDGRSGKSEGK--TYRFFDQLEA 210
                  *********975544..6*******85 PP
2trihelix106.22.2e-33525610187
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                  rW+k ev aLi++r++++ +++++  k+plWee+s+ m+++g++r++k+Ckekwen+nk++kk+ke++kkr +++s+tcpyf+ql+a
  Aradu.9H0MY 525 RWPKAEVEALINLRTSLDAKYQENGPKGPLWEEISALMKKHGYNRNAKRCKEKWENINKYFKKVKESNKKR-PQDSKTCPYFHQLDA 610
                  8*********************************************************************8.99***********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007174785185IPR001005SANT/Myb domain
PROSITE profilePS500903.9587183IPR017877Myb-like domain
CDDcd122031.59E-1887190No hitNo description
PfamPF138373.9E-8159211No hitNo description
SuperFamilySSF1014478.11E-6457466No hitNo description
SMARTSM007174.6E-4522584IPR001005SANT/Myb domain
PfamPF138377.2E-23524611No hitNo description
CDDcd122033.87E-29524589No hitNo description
Gene3DG3DSA:1.10.10.609.8E-5524581IPR009057Homeodomain-like
PROSITE profilePS500907.317524582IPR017877Myb-like domain
SuperFamilySSF1014478.11E-6541588No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 705 aa     Download sequence    Send to blast
MLGDSAVLGT GGGSSGGADA VVATAATSSA AAAVATASAP LPPPQSVSAA PHHHHDGTAE  60
MVGGGGGGGG GSTSGDDEKG ERSFGGNRWP RQETLALLKI RSDMDVAFRD ASVKGPLWEE  120
VSSYSLISNV VYGYSLSYAS IPSILALVNL GGLILMNELI RKLAELGYKR NAKKCKEKFE  180
NVYKYHKRTK DGRSGKSEGK TYRFFDQLEA LENNPIIHSP AIPQKSALQA TPVSMVKTTA  240
SLPSPPIITT MPQQQQVVVA SSGTNTTSAP PISIATVPSI APTTISMPQI QPNNSNNNNN  300
NNNSSNNNNP VYFPPPPPPP PASSFPSIPA ELLSNSSSSS TSSEETIEGG SRRNKRKRRW  360
KEFFEKLMKE VIEKQEDLQK RFLEAIEKRE KERSAREEAW RVQELQRINK EREILAQERS  420
IAAAKDQAVM TFLHKIADQQ NLPTPPFNNV SQPSPPPPPP PPPPPPPQQT QPTPPVVVPP  480
LPTPPRPPPS MEMVKVVDNN NNNNGENNNN NNNNNSSPLA ASSSRWPKAE VEALINLRTS  540
LDAKYQENGP KGPLWEEISA LMKKHGYNRN AKRCKEKWEN INKYFKKVKE SNKKRPQDSK  600
TCPYFHQLDA LYRERNSGKH DAAPAIVTTT PLMVRPEQQW PPQTDQPSSQ PREVTMEDAR  660
KGGNDEDEDE EKDNIGDEDD DEDDDDDDEG GSNFEIVASK PVSAE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168176KRNAKKCKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.9H0MY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015968000.10.0trihelix transcription factor GT-2
TrEMBLA0A445CYI40.0A0A445CYI4_ARAHY; Uncharacterized protein
STRINGGLYMA16G28250.21e-178(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37334181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.16e-57Trihelix family protein