PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.8WU9J
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 264aa    MW: 30183.8 Da    PI: 8.573
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.8WU9JgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.47.3e-16141227191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++YAk +GFs+r+++++k+   +ei+++  +Cs+egk +++ +    +++t+++   +  a++ ++  k  g w ++k++l+H+H+ +p
  Aradu.8WU9J 141 KFYKDYAKAAGFSTRVQSTNKK--GNEIKNQLITCSREGKCKSKISL---TEKTNPTAGLNYPARIYIHTLKdVGAWIISKVVLHHSHPYCP 227
                  6****************98887..8889*************999887...8899999***********998879**************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.4E-13141227IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MRLLNKFLNQ LTREYITSFF QRISFPFSNF LPSLFDLVRA FLFTFSFVVY VHFSLVSPSS  60
FTCVSLSVFL LHFSRFSWFL KSSFEIVLKI MDDSSSDCQL NQGEVDFEFE SNEVPEPLCV  120
VDDQFVLKVG MTFNTLEDAT KFYKDYAKAA GFSTRVQSTN KKGNEIKNQL ITCSREGKCK  180
SKISLTEKTN PTAGLNYPAR IYIHTLKDVG AWIISKVVLH HSHPYCPTQA EMLKQLKELS  240
MFVRRTIENS EKAGFNLSGS PLLG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.8WU9J
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-125HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992539.12e-97protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YGT83e-98A0A444YGT8_ARAHY; Uncharacterized protein
TrEMBLA0A445AGS93e-97A0A445AGS9_ARAHY; Uncharacterized protein
TrEMBLA0A445AZN61e-95A0A445AZN6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.19e-11FAR1 family protein