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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Aradu.8S04V |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
BBR-BPC |
| Protein Properties |
Length: 303aa MW: 34081.7 Da PI: 10.2488 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aradu.8S04V | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 313.1 | 9.1e-96 | 1 | 303 | 1 | 301 |
GAGA_bind 1 mdddgsre.rnkg.yye..............pa.aslkenlglqlmssiaerdaki..rernlalsekkaavaerdmaflqrdkalaernkalverdn 79
md++ +++ r+ yy+ ++ ++l +++++ s++aer+a+i +e ++a+sek++a+a+rd a+ qrd+ala+r++al erdn
Aradu.8S04V 1 MDSSQHENgRHNVdYYRgahslwnmdsqhqvKEpNALV--MNKKIRSIMAERQAAIleHELEAAISEKNEALAARDLALRQRDEALAQRDNALKERDN 96
78888888888877998999999999876653335666..99**************999999************************************ PP
GAGA_bind 80 kllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
+l+al+ ++ +g ++ +g+k + ++ +++ + r+ + + +++ea+++++ +k++k ++ +++ +k ++k+kk +e+ +++
Aradu.8S04V 97 ALTALKSQNI-----FKSGDGAQRGSKRMRQTAC------SPKDISRRDVSP-MTAKVSEAVKSNQ-AKRMKDENVINSKVSKPHSKAKKMGEDLNRQ 181
****998444.....3445677788887775544......333333333332.2334444444433.3333333444444444455888889999999 PP
GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaae 275
++e+ + k+e++ +d++ln v++De+ +PvP+C+CtG++rqCYkWGnGGWqS+CCttt+SvyPLP+ +++r+aRi+grKmS+++f++lL++ a++
Aradu.8S04V 182 AASEGI--KFKSEWDMQDVGLNLVAFDETIMPVPICTCTGVPRQCYKWGNGGWQSSCCTTTLSVYPLPQLPNKRHARIGGRKMSGSVFTRLLSRFASQ 277
999986..6***************************************************************************************** PP
GAGA_bind 276 GydlsnpvDLkdhWAkHGtnkfvtir 301
G+dls+p+DLk++WA+HGtn+++ti+
Aradu.8S04V 278 GHDLSTPLDLKNYWARHGTNRYITIK 303
*************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 303 aa
Download sequence Send
to blast |
MDSSQHENGR HNVDYYRGAH SLWNMDSQHQ VKEPNALVMN KKIRSIMAER QAAILEHELE 60
AAISEKNEAL AARDLALRQR DEALAQRDNA LKERDNALTA LKSQNIFKSG DGAQRGSKRM 120
RQTACSPKDI SRRDVSPMTA KVSEAVKSNQ AKRMKDENVI NSKVSKPHSK AKKMGEDLNR 180
QAASEGIKFK SEWDMQDVGL NLVAFDETIM PVPICTCTGV PRQCYKWGNG GWQSSCCTTT 240
LSVYPLPQLP NKRHARIGGR KMSGSVFTRL LSRFASQGHD LSTPLDLKNY WARHGTNRYI 300
TIK
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. {ECO:0000269|PubMed:14731261}. |
