PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.7P3Q2
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 867aa    MW: 99983 Da    PI: 8.8038
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.7P3Q2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.84.7e-142810914100
                  T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
           B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                  + l ++ kf++++gg    s  l l+ ++g +Wev+   rk++++++++kGW++F +   L+ g  ++F+++g+s+    v++f+ks
  Aradu.7P3Q2  28 QTLKISSKFTRRYGGG--LSNPLFLKPPDGTKWEVNW-TRKNDDEVWFQKGWNKFTENYSLDHGHLILFTYHGNSQL--DVHIFDKS 109
                  6799*********777..5667***************.5899999**************************998777..99999985 PP
2B335.12.4e-112252773185
                  .--SEEEEEETTS-EEEEEE...EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE- CS
           B3  31 eesktltledesgrsWevkliy.rkksgr...yvltkGWkeFvkangLkegDfvvFkld 85 
                  e++++l+      +sW+vkl+  ++   +    +l++GW+ F+++ +L  gD++vF+l+
  Aradu.7P3Q2 225 EKDVELK---IGEKSWKVKLRRgSN---SsncRYLGGGWSLFADESELLPGDVCVFELI 277
                  3333333...456*******55444...444589***********************87 PP
3B341.72.1e-132863581794
                  E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
           B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                   +p kfa ++g+    s  ++l+ ++g +W+v l  rkk ++++++kGWkeF +   L+ g  v+Fk++g+ s+f   v
  Aradu.7P3Q2 286 KIPDKFALKYGSG--LSNPVSLKPPDGTRWNVCL--RKKNDQVWFEKGWKEFTQKYSLNHGCLVLFKYEGTtSQF--DV 358
                  69********755..6667***************..*********************************987777..44 PP
4B342.71e-136086881397
                  TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
           B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                  ++ l +p +fa +hg+    s  + l+ ++g +W+v l  +kk ++++++kGW+eF +   L+ g  v+Fk++g+++ ++ v ++
  Aradu.7P3Q2 608 LKSLKIPDNFALKHGSG--LSNPVFLKPPDGTRWKVCL--KKKNDQVWFEKGWEEFTQNYSLDHGCLVLFKYEGTTSSQFDVIII 688
                  46799*********755..6667***************..*********************************986665666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086312.2815109IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.5E-1820109IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019365.1E-1821116IPR015300DNA-binding pseudobarrel domain
SMARTSM010198.0E-1022109IPR003340B3 DNA binding domain
PfamPF023624.1E-1127108IPR003340B3 DNA binding domain
CDDcd100176.72E-1230107No hitNo description
Gene3DG3DSA:2.40.330.104.3E-11192278IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.08E-10193280IPR015300DNA-binding pseudobarrel domain
SMARTSM010190.0018197283IPR003340B3 DNA binding domain
PfamPF023621.2E-8223278IPR003340B3 DNA binding domain
CDDcd100171.98E-7226278No hitNo description
PROSITE profilePS508638.332235276IPR003340B3 DNA binding domain
SMARTSM010190.004284364IPR003340B3 DNA binding domain
SuperFamilySSF1019365.3E-14284362IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.2E-15284362IPR015300DNA-binding pseudobarrel domain
PfamPF023621.5E-10286356IPR003340B3 DNA binding domain
PROSITE profilePS5086311.35287364IPR003340B3 DNA binding domain
CDDcd100175.11E-12287362No hitNo description
Gene3DG3DSA:2.40.330.102.3E-8427506IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.37E-7428507IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508639.53432527IPR003340B3 DNA binding domain
SMARTSM010190.0071432528IPR003340B3 DNA binding domain
CDDcd100174.36E-7432507No hitNo description
Gene3DG3DSA:2.40.330.101.4E-17582690IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.18E-15596689IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.351596691IPR003340B3 DNA binding domain
CDDcd100171.29E-10598689No hitNo description
SMARTSM010195.2E-7603691IPR003340B3 DNA binding domain
PfamPF023628.7E-11608686IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 867 aa     Download sequence    Send to blast
MSSSSQWRGK AIIPIHFSAI IFNKTDLQTL KISSKFTRRY GGGLSNPLFL KPPDGTKWEV  60
NWTRKNDDEV WFQKGWNKFT ENYSLDHGHL ILFTYHGNSQ LDVHIFDKSA SEILYPGLKL  120
NTTPTTTACD DEKNIKLDLM HNDDDDDDSI EILKPCKHKR SMLVLVAERR SSCSSLNWPK  180
QERAQEVAMN FVSDNPFFTM FITHVHLAHY KAGVPNMKEY TDEDEKDVEL KIGEKSWKVK  240
LRRGSNSSNC RYLGGGWSLF ADESELLPGD VCVFELINIH PLQFRKIPDK FALKYGSGLS  300
NPVSLKPPDG TRWNVCLRKK NDQVWFEKGW KEFTQKYSLN HGCLVLFKYE GTTSQFDVII  360
IDDGALEMDY SSYNGNDNDD VSVQIVKEIH PCKKNKKTMR DEKDVTTSLS LNWPREPRAR  420
QEANKFVSNN PFFTVLIKPP HITEYRLCIP GLEGYVDNGV KNVKLEYGDR SWPVKMLNCN  480
KTYSNRFLSA GWNLFAQENE LKPGDKISSK FTRRYGGGLS NPLFLKPPDG TKWEVNWTRK  540
DDEEVWFQKD EKKKVAERRS SCSSLNWPKQ ERAQEVAMNF VSDNPFFTMF ITHVHLAHYK  600
AIILKTNLKS LKIPDNFALK HGSGLSNPVF LKPPDGTRWK VCLKKKNDQV WFEKGWEEFT  660
QNYSLDHGCL VLFKYEGTTS SQFDVIIIDD SALEIDYSSY GNDDDDVSVQ IAKEIHPYKK  720
NKETMRGEKN VTTSLSLNWP REPRAREEAI KFVSNNPFFT VLLKAPHITQ YLLCIPVLEG  780
YVDNGVKNVK LEYRDRSWPV RMLNRPLLLI SLSSFHNTIK QNNVKHVMRN DSSLVLKTDA  840
VVKGLITITN VIILVTTTII PFIEKYK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.7P3Q2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025621634.10.0B3 domain-containing transcription factor VRN1-like
TrEMBLA0A445BE910.0A0A445BE91_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-18B3 family protein