PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.7AC9I | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 297aa MW: 35056 Da PI: 9.0142 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 33.2 | 1e-10 | 160 | 200 | 22 | 59 |
EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 22 rsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 rsYY+C+++ +C++ k+v+r +edp + +tY+g+H+++ Aradu.7AC9I 160 RSYYKCSYKneeDCKAIKHVQRIQEDPPLYRTTYSGHHTCK 200 9*******99999**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF118290 | 1.31E-5 | 107 | 136 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.9E-20 | 108 | 200 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.714 | 108 | 202 | IPR003657 | WRKY domain |
SMART | SM00774 | 6.3E-23 | 113 | 201 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.7E-4 | 114 | 137 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.22E-10 | 158 | 200 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.0E-11 | 159 | 200 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence Send to blast |
MENNNSGRKE AIEQELIRGR DVAKQLLEVL IIHKSNRNEE GIERSMVKMP FVEDAVRKIF 60 ISFTNTLLLF NSDTQHNRSD IHQGCKKSKR PPTLCHKRKS FAPTWSIDNA ILSEDGLEWR 120 KYGQKKTKDC RYIRYMFLHI AFHIIYLLRK DRFWVKCLRR SYYKCSYKNE EDCKAIKHVQ 180 RIQEDPPLYR TTYSGHHTCK CSFVNYPHMK LESAPSLQES SKLLSFNNNY YNNNTLQSKE 240 MKHLSSSISS TKQEPVEVII PNDDHNQIHL LSDCELDFNY SSTESVAFDI FMGMFKF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.7AC9I |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020982569.1 | 0.0 | probable WRKY transcription factor 62 | ||||
TrEMBL | A0A371EMX9 | 7e-62 | A0A371EMX9_MUCPR; Putative WRKY transcription factor 70 (Fragment) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12638 | 11 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G01900.1 | 1e-18 | WRKY DNA-binding protein 62 |