PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.77510

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 507aa MW: 57351.7 Da PI: 7.9065

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.77510	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.1	6.8e-14	115	183	1	69
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvk 69 +fY++Y+k GF +rk s k +n+++++r+f C+k g ++++ + ++er +r etrt+C+akl + Aradu.77510 115 EFYKRYGKCHGFGIRKGDSGKD-DNRRVIWRRFFCNKVGLMQHKHYErLDRERDHRLETRTNCDAKLSIL 183 6***************9998.7777********999998876789999**********9985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.1E-12	115	183	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence Send to blast
MGKEDKVKSN VDVSGENVRS CKGVCTLGST LGSNCGVIVR MEAKLDDGVN RGAGIQEDGS 60 GETQSETNKT LIGDGKTDTC DEGVKGEATE YRDVLLLTEA DIMRKAFCTN EAAYEFYKRY 120 GKCHGFGIRK GDSGKDDNRR VIWRRFFCNK VGLMQHKHYE RLDRERDHRL ETRTNCDAKL 180 SILWDEYWNN ELESHLKSIH SNPVITTCLD PLERFAAAVY TRELFLDVKR VIDGVGAVNF 240 VRKVRRSTTV VYTLKTTAFQ HEHAREIPSR LVLKRWHKDA KSLDNYGEGR ADECSERGFL 300 LRQDTLHSAS QWFSFIAAQG PGLFNTAMSG IRALCEQIEV AYDQKVPSAE GRDTPSVKDP 360 MVVKTKGAPR ITKMNGRKRR YSMCQKAGHT KRHCTEKRGV NMQANPQVDE KAAEFGSEGS 420 SPTENAKGRC DASKVLPPKA GELVDDSDVE EFRFRLNEEG QTRHIRFESW DSVLPMCFND 480 DNCVKIEDMM HDIIRVIERL ASNPRQV

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence Send to blast

MGKEDKVKSN VDVSGENVRS CKGVCTLGST LGSNCGVIVR MEAKLDDGVN RGAGIQEDGS  60
GETQSETNKT LIGDGKTDTC DEGVKGEATE YRDVLLLTEA DIMRKAFCTN EAAYEFYKRY  120
GKCHGFGIRK GDSGKDDNRR VIWRRFFCNK VGLMQHKHYE RLDRERDHRL ETRTNCDAKL  180
SILWDEYWNN ELESHLKSIH SNPVITTCLD PLERFAAAVY TRELFLDVKR VIDGVGAVNF  240
VRKVRRSTTV VYTLKTTAFQ HEHAREIPSR LVLKRWHKDA KSLDNYGEGR ADECSERGFL  300
LRQDTLHSAS QWFSFIAAQG PGLFNTAMSG IRALCEQIEV AYDQKVPSAE GRDTPSVKDP  360
MVVKTKGAPR ITKMNGRKRR YSMCQKAGHT KRHCTEKRGV NMQANPQVDE KAAEFGSEGS  420
SPTENAKGRC DASKVLPPKA GELVDDSDVE EFRFRLNEEG QTRHIRFESW DSVLPMCFND  480
DNCVKIEDMM HDIIRVIERL ASNPRQV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.77510

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016205516.2	1e-164	protein FAR1-RELATED SEQUENCE 5-like isoform X2
Refseq	XP_020959702.1	1e-164	protein FAR1-RELATED SEQUENCE 5-like isoform X2
Refseq	XP_025663335.1	1e-164	protein FAR1-RELATED SEQUENCE 5 isoform X2
Refseq	XP_025663336.1	1e-164	protein FAR1-RELATED SEQUENCE 5 isoform X2
Refseq	XP_025663337.1	1e-164	protein FAR1-RELATED SEQUENCE 5 isoform X2
TrEMBL	A0A445C7F5	0.0	A0A445C7F5_ARAHY; Uncharacterized protein