PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.74C4V | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | B3 | ||||||||
Protein Properties | Length: 223aa MW: 25876.6 Da PI: 10.081 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 30.8 | 5.1e-10 | 86 | 177 | 5 | 95 |
-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 5 ltpsdvlksgrlvlpkkfaeeh...ggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ++++ +k +r+++ +fa+ gg+ e+ + t++ + +++++ + +k+++r y ++ Wk+Fvk ++L+ g +vF+ +++ ++ +v+ Aradu.74C4V 86 RLTEYDMKADRFYIRCEFARLLlksGGS--EQWKFTVKGsKITKTFTMHVLKSKGKNReYKIGPKWKDFVKMHKLRPGYLCVFRSVSN--KNHLVQ 177 458899999**********777876555..345666666356699***99775555556*************************5544..333555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 4.12E-11 | 82 | 179 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 1.9E-9 | 82 | 180 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 1.1E-7 | 87 | 176 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence Send to blast |
MDFYAFHYVK DIVDISLLKL IQDELGLNYF DGLDDVSYDI EDNEMHRNMK SSGVQRIQTN 60 TSNGTTVKKR SITKKRGCVA EHYSKRLTEY DMKADRFYIR CEFARLLLKS GGSEQWKFTV 120 KGSKITKTFT MHVLKSKGKN REYKIGPKWK DFVKMHKLRP GYLCVFRSVS NKNHLVQKFQ 180 NIKDDRKSRV SGLEEKKKSL DERGELEEGG ETRPVSTNAA DPA |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.74C4V |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015965608.1 | 1e-131 | uncharacterized protein LOC107489370 | ||||
TrEMBL | A0A445D629 | 9e-42 | A0A445D629_ARAHY; Uncharacterized protein |