PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.6A4Y4
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 544aa    MW: 61334.6 Da    PI: 6.8585
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.6A4Y4genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR166.76.2e-21186277191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +fYn+Y+   GF +rk+   +  ++g+i++r++vC+keg r+ +  + ++++r+ r+ trt+C a+l++k+++  g+w+v+ +++ HnH+l+p
  Aradu.6A4Y4 186 QFYNAYSCWHGFVMRKHGVVRD-NQGRIISRQLVCNKEGWRNMRYLDmDDRSREARSLTRTKCPARLRIKLDYgCGRWKVSCFVESHNHDLTP 277
                  6**************9999887.8888***************9998867889999******************99***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.0E-19186277IPR004330FAR1 DNA binding domain
PROSITE profilePS5096610.151377413IPR007527Zinc finger, SWIM-type
SMARTSM005752.6E-5388415IPR006564Zinc finger, PMZ-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    Send to blast
MGASALKMKV GRVMFSDVKQ SDSECPETEI GRYVLSWGTR TVRVGCILTP HSGHAPPSPI  60
MASNSTTVVS SNLKPVDSCF LNPQVLRCVG LGKGHLPPTP TVQFLSVEAQ PLVLIKEDDV  120
NNDSDNDLGV DFDYQPNAED DADDDDVDSL DSTSKSEEVC GVKRIANLMV EDIWNLEFRT  180
EDEACQFYNA YSCWHGFVMR KHGVVRDNQG RIISRQLVCN KEGWRNMRYL DMDDRSREAR  240
SLTRTKCPAR LRIKLDYGCG RWKVSCFVES HNHDLTPPQF AHLNTLIDFM HNLDRALKEY  300
RNNKLIADFK SQCSELVMIT SLEAYERSAS CYFTRNIFKE IRNEIQRAGA LNITVLSTTL  360
DKVEFSVTAL GDPAKDRRVE VDRSKNLFSC SCKLFESRGI PCSHIFYAMK FENILEFPDS  420
LIYKRWTKNA NNEFISTNMP VNDDIERVLK FRVGALASNC NKLCDIACKD LADFDEVQSE  480
LVNLVIRLQS RKQGKSTPNV NVEGINDPFV VKSKGSPSKR SSGGRREHTL IATSTVITTS  540
AVQI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.6A4Y4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015943835.11e-179protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445BN500.0A0A445BN50_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF845424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-18FAR1-related sequence 5