PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.64782

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 280aa MW: 32617.5 Da PI: 8.6205

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.64782	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.7	6.9e-17	27	113	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 kfY++Y+k +GFs++++++++ ++i+++ vC +eg+ +++ + + +t+++ +C a++ v+k+k g w ++k++l+H+H+++p Aradu.64782 27 KFYKHYSKLTGFSTKIRNTTRD--ADKIKNQLIVCPREGRWKSKISP---TLKTNPSAGLNCPARIYVHKMKdVGLWIISKVVLNHSHPCCP 113 6**************98877..7779********9998777...999**************999*************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.9E-14	27	113	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence Send to blast
MQTSCVVDEK FVPKVGMIFK TLEEVGKFYK HYSKLTGFST KIRNTTRDAD KIKNQLIVCP 60 REGRWKSKIS PTLKTNPSAG LNCPARIYVH KMKDVGLWII SKVVLNHSHP CCPDQAEMLK 120 QHMELSMFVR RSIETHEEVG IRPSKTYQSF VAATCSHREL TCTVFDSPDL IVSVWYAELY 180 EDCHIWIPVY LDHHFWAGMR STQMSESMHL FFNKFITWNS SLRQFVKQYD SCLASREQAE 240 REFNAADFHT VIPYSTKSAI EAQFQHVYTH EKFKLNSEVK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.64782

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_029145717.1	1e-101	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445B8J0	0.0	A0A445B8J0_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	6e-12	far-red elongated hypocotyls 3