PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.4PH73
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NF-YB
Protein Properties Length: 101aa    MW: 11326.9 Da    PI: 4.6382
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.4PH73genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB41.53.2e-131298687
        NF-YB  6 rflPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvyl 87
                 ++lP + v ri+k  l    +++ is  kda     e +  fi ++++ a+d c++ kr+ +n+dd++ al +  f +++ plk+ l
  Aradu.4PH73 12 EELPRTIVRRIVKDKLSrcsEDGDISvnKDALLAFSESARIFIHYISATANDICKESKRQIVNADDIFKALEETDFSEFIRPLKASL 98
                 578999999***99986222455554338999999************************************************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.20.101.2E-261099IPR009072Histone-fold
PfamPF008081.3E-101382IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
SuperFamilySSF471136.01E-211499IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
MAEEAKAVPE AEELPRTIVR RIVKDKLSRC SEDGDISVNK DALLAFSESA RIFIHYISAT  60
ANDICKESKR QIVNADDIFK ALEETDFSEF IRPLKASLEA P
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.4PH73
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015951689.13e-65DNA polymerase epsilon subunit 3
TrEMBLA0A445E5482e-63A0A445E548_ARAHY; Uncharacterized protein
STRINGGLYMA11G18960.15e-51(Glycine max)
STRINGXP_007132441.14e-51(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118633236
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.12e-41nuclear factor Y, subunit B11