PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.45JZY
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 426aa    MW: 49109.2 Da    PI: 10.0234
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.45JZYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR154.54e-171197191
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                 kfY++YAk +GFs+r+++++++   +e++++  +Cs+egk +++ ++   +++ +++   +C  ++ ++  k  g w ++k+el+H+H+++p
  Aradu.45JZY 11 KFYRNYAKAAGFSTRVRSTNRK--GNEVKNQLITCSREGKWKSKISS---TEKINSTAGLNCPTRIYIHTLKdVGAWIISKVELDHSHPCCP 97
                 6****************98887..8889**************99888...777888999*********998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.9E-141197IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MTFTTLEDAG KFYRNYAKAA GFSTRVRSTN RKGNEVKNQL ITCSREGKWK SKISSTEKIN  60
STAGLNCPTR IYIHTLKDVG AWIISKVELD HSHPCCPSKA EMLKQHKKLS MSIRRTIENN  120
KEADLYEYRH IWNSSLFQFV KQYDNCLGSR EQAERESDAA NFHTVIPCAT KSSIEAQFQD  180
VYTHQKFREV QAQFRGNATC ITRLTNSALG YSVYEVGEQV SSSIFNKFVV TYDSVAAKVK  240
CQCLLFELKG ILRRHALSVL SFEQVSQVSP RYILERWSKK VKRRHTHIKS SHDEPLLEPR  300
SKRFDELVFR SQNICEFASE SEDLTAILHR AYDTVMVEME ELKAKRKGTY SLSHEDANLE  360
SVNELQSPPR IRTRGRLKNR LGSKLDKQIK NALKKKKTKA LNEVKVMFCK YVVIEFNFVI  420
NSLANM
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.45JZY
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020993575.10.0protein FAR-RED ELONGATED HYPOCOTYL 3-like
TrEMBLA0A445B3W80.0A0A445B3W8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.17e-21FAR1-related sequence 4