PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.457AG
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GeBP
Protein Properties Length: 307aa    MW: 34637.2 Da    PI: 9.1055
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.457AGgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57379.94e-2564160297
       DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkks..isfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                  lfqr++seeDei +L+Gl +f aktgk+p++  d+fy+f+k+s  i ++vs  ql eKirrLKkKf++   k k+gk  +  k+h+ ++++l k +Wg
  Aradu.457AG  64 LFQRVFSEEDEIGILKGLSEFIAKTGKEPYKCADEFYDFMKGSnlIRANVSCMQLKEKIRRLKKKFENILLKEKNGKG-TTLKPHELEALQLGKNVWG 160
                  79**************************************9755599*************************888887.6789**************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.7E-2465160IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MAKQKQVAPE DSDDEPQSQP SASGSKRAAE NSIDDSKQPK RGKKAQEDNA VGSVEEDPQK  60
SKSLFQRVFS EEDEIGILKG LSEFIAKTGK EPYKCADEFY DFMKGSNLIR ANVSCMQLKE  120
KIRRLKKKFE NILLKEKNGK GTTLKPHELE ALQLGKNVWG HDGRGGEAVL NETAKKDTVN  180
NEKAAKKALV PHSKGKAEAK SKLNSEPLDS NEGRRMSEFS VTSLALTSML RYDGTFGKPF  240
GEDYIRKGIE LLGVSKREDI EARWRKFKDA ENKLYVEIAE FYAEQAKMIH YLKQDEVYRA  300
FVEYAIV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.457AG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015931664.10.0probable transcription factor At1g61730
TrEMBLA0A445C6H30.0A0A445C6H3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18313490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.12e-18DNA-binding storekeeper protein-related transcriptional regulator