PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.426MY
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 1048aa    MW: 120821 Da    PI: 8.9534
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.426MYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3314.6e-104781898
                 --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                 lp+kf +++g+    +  + l+  +  +W++    ++++g++ ++kGW+eF+    L+ g  + F+++g+s+  + v++f+
  Aradu.426MY  4 LPNKFSKKYGNG--FPNPVYLKPADDTEWRIDW--TNQDGEIQFEKGWREFAAYYSLENGHLLWFEYNGTSK--MEVQIFD 78
                 9********766..4556***************..*******************************988554..5899987 PP
2B333.57.3e-113284051598
                  -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  +  +p+kf + +gg  +++  + l+ ++g +W++    +++ g++++++GWkeF+    L++g  + F ++++s f   v++f+
  Aradu.426MY 328 LQKIPRKFSRIYGGGVPNP--VYLKLPDGTQWKIDW--TNHNGEIIFENGWKEFAAYYSLDQGHLLWFDYKKTSLF--EVHIFD 405
                  568******9995554565..9**************..********************************998888..888886 PP
3B336.49.4e-125205991698
                  EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                    +p +f+ ++ +++e+++++++   +g+ +  kl+y ++ ++ ++++GW +F++a +L+ gD+ vF+l++r++  +  +++r
  Aradu.426MY 520 RNFPASFFIKYFKNEEQKVKIRF---EGKLFPAKLRYYRQNSTAFISSGWLQFAQASKLQPGDVTVFELVDRDDPVFETHIYR 599
                  46899***9**989888777775...57*******9988888999***********************997766555666665 PP
4B343.75e-146807591799
                  E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  v+p +f++++  kk+ ++ ++l++   +    kl y  +s++ ++++GW+ Fv a +Lk+gD++vF+l++++++ l v+++r+
  Aradu.426MY 680 VIPVPFFTKYFAKKKPNIHIKLRN---KLLAAKLLYYPSSSAAYISAGWQAFVAASNLKAGDVCVFELVNEKDRVLDVHIYRA 759
                  8*********66666677899888...7777777779********************************99999999999986 PP
5B342.31.4e-137678421798
                  E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                   +p+kf++++gg  +++  + l+ ++g +W+v+   ++++g ++++kGWkeF+    L+ g  + F+++g+s+f   v++f+
  Aradu.426MY 767 KIPNKFTSKYGGGVKNP--VYLKPPDGTQWKVQW--TQHDGDILFEKGWKEFAAYYCLDHGHLLRFEFNGTSCF--EVHIFD 842
                  69********5554455..***************..**************************************..888886 PP
6B335.61.6e-119591041994
                   HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
           B3    9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94  
                   ++l+++r  +  +f  +h ++ke++++++    +g+ W  kl       + ++++GW+ F  +n+Lk+gD++vF+l++ ++  l  
  Aradu.426MY  959 SNLQRSRANFKASFYIKHFENKEQNVEIR---YEGKLWPAKLLCYPAAAAAYISNGWRPFSLENDLKVGDVCVFELINGENPVLDA 1041
                   56666777888899999988999988888...689*******88999999*************************99755554555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086312.52180IPR003340B3 DNA binding domain
SMARTSM010190.018180IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.2E-14381IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.96E-14387IPR015300DNA-binding pseudobarrel domain
CDDcd100173.91E-7478No hitNo description
SMARTSM010191.4112199IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.108.0E-6147199IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.14E-5149198IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508638.698160199IPR003340B3 DNA binding domain
SuperFamilySSF1019367.85E-14226311IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508637.373229310IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.5E-13232318IPR015300DNA-binding pseudobarrel domain
SMARTSM010191.0E-4238323IPR003340B3 DNA binding domain
PfamPF023622.1E-7246322IPR003340B3 DNA binding domain
CDDcd100172.84E-10246321No hitNo description
PROSITE profilePS5086311.321314407IPR003340B3 DNA binding domain
SuperFamilySSF1019369.02E-16321407IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.5E-15323408IPR015300DNA-binding pseudobarrel domain
SMARTSM010192.1E-4325407IPR003340B3 DNA binding domain
PfamPF023626.1E-8328405IPR003340B3 DNA binding domain
CDDcd100171.25E-8331405No hitNo description
Gene3DG3DSA:2.40.330.104.1E-15500601IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.77E-13501600IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.546505601IPR003340B3 DNA binding domain
CDDcd100179.44E-11506599No hitNo description
SMARTSM010197.9E-7507601IPR003340B3 DNA binding domain
PfamPF023627.1E-10520600IPR003340B3 DNA binding domain
SMARTSM010194.2E-7672760IPR003340B3 DNA binding domain
SuperFamilySSF1019364.32E-13678759IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.104.7E-14679759IPR015300DNA-binding pseudobarrel domain
PfamPF023621.8E-11680759IPR003340B3 DNA binding domain
CDDcd100173.43E-12680758No hitNo description
PROSITE profilePS508636.767709744IPR003340B3 DNA binding domain
PROSITE profilePS5086311.18751844IPR003340B3 DNA binding domain
SMARTSM010191.8E-5762844IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.0E-16766844IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.53E-16767844IPR015300DNA-binding pseudobarrel domain
PfamPF023621.5E-10767842IPR003340B3 DNA binding domain
CDDcd100171.85E-10768842No hitNo description
Gene3DG3DSA:2.40.330.103.4E-179441047IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019368.44E-169451047IPR015300DNA-binding pseudobarrel domain
CDDcd100171.15E-119501045No hitNo description
SMARTSM010193.3E-79521047IPR003340B3 DNA binding domain
PfamPF023623.7E-99601045IPR003340B3 DNA binding domain
PROSITE profilePS5086310.8429891047IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1048 aa     Download sequence    Send to blast
MQKLPNKFSK KYGNGFPNPV YLKPADDTEW RIDWTNQDGE IQFEKGWREF AAYYSLENGH  60
LLWFEYNGTS KMEVQIFDMS CLEIEYPSKD LINDGNLAGI LNEQPQPKEK ANAAPKPSSP  120
SRASFFRKYS EKEQNVQIRF QKILIPAKLR CYPYNSQAII SSGWGLFVRT STLQPGDVTI  180
FELIEREDPV LDVHIYRAQE SDLSKSRAVS LCSYPCRNLY DFYCYTSRNC DFVMTMKIKI  240
IMLQKVPVSF FNKYFKKKEP YVVIRFDSKL WPAKLLCYPG SAYISCGWLD FTLDNNLKAG  300
DVCILELVNG KDALLECRIY RADVSLALQK IPRKFSRIYG GGVPNPVYLK LPDGTQWKID  360
WTNHNGEIIF ENGWKEFAAY YSLDQGHLLW FDYKKTSLFE VHIFDMSCLE INYPPYDHTD  420
DDCVEILNKP PSPVRGDLRK RSVAPLSTPS KTKRLRSATK SRDVERGSQS KDTSLEMPVF  480
SSSRQDFLGI GFKALKEAEK FSSENPFFIV KIRQAIRSNR NFPASFFIKY FKNEEQKVKI  540
RFEGKLFPAK LRYYRQNSTA FISSGWLQFA QASKLQPGDV TVFELVDRDD PVFETHIYRA  600
KASFQVMVLW LSISKSSSEF QVRKSLFHGK DHTNKSTKNN CCKFMLLHSS VCKLISCYCY  660
TCTNCGSVLM MMMKIFVIQV IPVPFFTKYF AKKKPNIHIK LRNKLLAAKL LYYPSSSAAY  720
ISAGWQAFVA ASNLKAGDVC VFELVNEKDR VLDVHIYRAG RSFALQKIPN KFTSKYGGGV  780
KNPVYLKPPD GTQWKVQWTQ HDGDILFEKG WKEFAAYYCL DHGHLLRFEF NGTSCFEVHI  840
FDMSGLEIHY PFNNRIDDDS VETLNELPPE CWGRERKRLK TPLSLSLPFT SKQLRIATET  900
RDMEGGSQPE EKNIEMPIIP SVIHRSDVFE PGTCGFRCLE EAQKFNSENP SFMIKLGKSN  960
LQRSRANFKA SFYIKHFENK EQNVEIRYEG KLWPAKLLCY PAAAAAYISN GWRPFSLEND  1020
LKVGDVCVFE LINGENPVLD AHIYRANG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.426MY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015946997.10.0B3 domain-containing protein Os12g0591400
TrEMBLA0A445B0R50.0A0A445B0R5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.19e-27B3 family protein