PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.3MA41

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Trihelix

Protein Properties

Length: 1032aa MW: 115966 Da PI: 7.9966

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.3MA41	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.3	2.2e-09	242	302	20	81
trihelix 20 rlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 ++rgk ++ + +ev+++++++g++r +k+ kw+n+ ++++k+ e+e++++ e++ +y Aradu.3MA41 242 GMSRGKTRADKDREVAEFLQRHGVSRDAKTAGTKWDNMLGEFRKVYEWERGGEREQV-GKSY 302 4568999999****************************************9965555.3445 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF56112	8.61E-15	838	1011	IPR011009	Protein kinase-like domain
CDD	cd00180	4.99E-9	875	1012	No hit	No description
Gene3D	G3DSA:1.10.510.10	5.8E-7	878	976	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 1032 aa Download sequence Send to blast
MGDKGDSSKK QPQQSHHPKQ QQQISSSPKS LPQASAEEPI SETRTIHHQQ QQSPVVVVSG 60 ATPFISSSPL YVSSGASSSP FEQQQQQQFE ALNVKRPRYS TGQWKLLPSP SSQQHQKQMA 120 AMLPSESSPS PSANPPQPLQ TYAAAAAAAA ASSSSDTASS PSHSPMPLLS GGSGHEGSKP 180 TSEGEQPPQQ LHHQQLRKGK YVSPVWKPNE MLWLARAWKA QYQGGGSDGS SSRTEQQQEL 240 GGMSRGKTRA DKDREVAEFL QRHGVSRDAK TAGTKWDNML GEFRKVYEWE RGGEREQVGK 300 SYFRLSPYER KLHRLPASFD EEVFEELSQF MGSRMRSSSH GGGRGVDDGR TASHAAVATV 360 RPLPLPPPRP FKDDDLPLSA RTTKQLGGNE AFFHGPNRGS LLGLDPHQHN VLDIQGASSS 420 SSSRELRRIG KIRMTWEECV SLWAEEGEVH RGRVRVQASS FLNADELTYF DESMVPCLME 480 SFEDGPLRGY SVDRFVSGQQ VKVFGRRKSS SASSPPSSGF NERLQFPSKS PSIRSANTTT 540 TVEFRDPSEY YVECLQQRIM SSLQQHSLPT LFELKRYLQE PPPQDLRFPL RKQVYDDLPS 600 SKDLFFAPST HPPFLDSRTF LYDVVSPLIR SNNPTILPSS RDSFIPLWDH CINSILSFFC 660 NQDFILIRKP TYTTTSSTAL QDQWPNVTGF VNNYCLWRGE ETDQLREGQQ DPSSTIVEKL 720 LWTYADLPYI LGYYAIGTKV TLCALSRSTQ SDQGETRIVR TDLQQLNLTT PTERIKALVP 780 CFRIATLLPL LSKICNNSKG LGIFTYSDFE RFDHGNGVVT EMTPNTCTRM FSDKRKWLAA 840 KEVYEILKHR IPHAETLVQC CENDMSLVFK PRGCRTKPSN CEELVEALKC VTKALVALHD 900 LSFMHRDLGW EKVLRRSDSR ERERESEWFV CGFEEASGAP ELNRRVRVGR EGEWAPEMER 960 GLHSVKVDVW GVGWLIRTCG LVVPKMVKEL ERMCMENNPE HRPTAADCYH HLLQLQSSLS 1020 HHQPPPAAAH LM

Sequence ? help Back to Top

Protein Sequence Length: 1032 aa Download sequence Send to blast

MGDKGDSSKK QPQQSHHPKQ QQQISSSPKS LPQASAEEPI SETRTIHHQQ QQSPVVVVSG  60
ATPFISSSPL YVSSGASSSP FEQQQQQQFE ALNVKRPRYS TGQWKLLPSP SSQQHQKQMA  120
AMLPSESSPS PSANPPQPLQ TYAAAAAAAA ASSSSDTASS PSHSPMPLLS GGSGHEGSKP  180
TSEGEQPPQQ LHHQQLRKGK YVSPVWKPNE MLWLARAWKA QYQGGGSDGS SSRTEQQQEL  240
GGMSRGKTRA DKDREVAEFL QRHGVSRDAK TAGTKWDNML GEFRKVYEWE RGGEREQVGK  300
SYFRLSPYER KLHRLPASFD EEVFEELSQF MGSRMRSSSH GGGRGVDDGR TASHAAVATV  360
RPLPLPPPRP FKDDDLPLSA RTTKQLGGNE AFFHGPNRGS LLGLDPHQHN VLDIQGASSS  420
SSSRELRRIG KIRMTWEECV SLWAEEGEVH RGRVRVQASS FLNADELTYF DESMVPCLME  480
SFEDGPLRGY SVDRFVSGQQ VKVFGRRKSS SASSPPSSGF NERLQFPSKS PSIRSANTTT  540
TVEFRDPSEY YVECLQQRIM SSLQQHSLPT LFELKRYLQE PPPQDLRFPL RKQVYDDLPS  600
SKDLFFAPST HPPFLDSRTF LYDVVSPLIR SNNPTILPSS RDSFIPLWDH CINSILSFFC  660
NQDFILIRKP TYTTTSSTAL QDQWPNVTGF VNNYCLWRGE ETDQLREGQQ DPSSTIVEKL  720
LWTYADLPYI LGYYAIGTKV TLCALSRSTQ SDQGETRIVR TDLQQLNLTT PTERIKALVP  780
CFRIATLLPL LSKICNNSKG LGIFTYSDFE RFDHGNGVVT EMTPNTCTRM FSDKRKWLAA  840
KEVYEILKHR IPHAETLVQC CENDMSLVFK PRGCRTKPSN CEELVEALKC VTKALVALHD  900
LSFMHRDLGW EKVLRRSDSR ERERESEWFV CGFEEASGAP ELNRRVRVGR EGEWAPEMER  960
GLHSVKVDVW GVGWLIRTCG LVVPKMVKEL ERMCMENNPE HRPTAADCYH HLLQLQSSLS  1020
HHQPPPAAAH LM

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.3MA41

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020999670.1	0.0	uncharacterized protein LOC107490890
TrEMBL	A0A445CZW2	0.0	A0A445CZW2_ARAHY; Uncharacterized protein
STRING	XP_007152366.1	0.0	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF11857	28	31

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	7e-07	Trihelix family protein