PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.3BA5T
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WOX
Protein Properties Length: 368aa    MW: 40447.3 Da    PI: 8.789
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.3BA5TgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.11.3e-1745104256
                  T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
     Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 
                  ++R+++++eq+++Le+ F++   +p ++e++++ ++l    ++ +++V++WFqNr+ + k
  Aradu.3BA5T  45 KPRWNPKPEQIRILESIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRTK 104
                  89*****************99*************************************99 PP
2Wus_type_Homeobox111.64.1e-3644106264
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                        +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R ++k
        Aradu.3BA5T  44 PKPRWNPKPEQIRILESIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRTKHK 106
                        689**********************************************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.6E-921104IPR009057Homeodomain-like
PROSITE profilePS5007110.54441106IPR001356Homeobox domain
SuperFamilySSF466893.42E-1241109IPR009057Homeodomain-like
SMARTSM003896.7E-843110IPR001356Homeobox domain
CDDcd000865.69E-844106No hitNo description
PfamPF000463.2E-1545105IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0010075Biological Processregulation of meristem growth
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MFKSKPTWHH DITITATASS SSSSSSSSSS RTSPYSCDDR SPEPKPRWNP KPEQIRILES  60
IFNSGMVNPP RDEIRKIRAQ LQEYGQVGDA NVFYWFQNRK SRTKHKLRHL HTKNNPPPPP  120
PPPSSTSSSS SDKSSSPPTT TTTTTNTNTY FNTHNHTATI PPPPPPPPPP HVAAETFIFP  180
LQHHQGITSS PQGLFFSELS NVVQAHHYQP SPPPPHQLMM HNVVGPCTSL LLSEIMMNNN  240
ASKKEQQEHA SNNNKSLKLM HHTPKLSFCV TPPTTTTATT ATVNALLTQD AVGSGDGSEK  300
ITVFINDVAF EVAAGPFNVR EAFGEDAVLI HAITGQPLLT NQWGLTLHSL HHGASYYLLL  360
HTLPHAPY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.3BA5T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015942959.10.0WUSCHEL-related homeobox 9-like isoform X1
RefseqXP_020988656.10.0WUSCHEL-related homeobox 9-like isoform X2
TrEMBLA0A445BBQ10.0A0A445BBQ1_ARAHY; Uncharacterized protein
STRINGXP_007148089.11e-110(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38243361
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33880.12e-48homeobox-3