PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.2JT32
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 298aa    MW: 32042.5 Da    PI: 10.204
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.2JT32genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof42.21.7e-13761023662
       zf-Dof  36 CrryWtkGGalrnvPvGggrrknkkss 62 
                   +ryWt+GGalrnvPvGgg+r+nkk++
  Aradu.2JT32  76 LKRYWTRGGALRNVPVGGGCRRNKKNK 102
                  58**********************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074786.0E-86095IPR003851Zinc finger, Dof-type
PfamPF027011.4E-877100IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MVFSSIPVYV DPPNWQQQPN HHQANVNDNP HLLPPLPPQV QAGPVGGGGA IAGSIRPGSM  60
ADRARLAKIP PPEAALKRYW TRGGALRNVP VGGGCRRNKK NKRSSSRSKS PPNNNNEKQQ  120
SSSAIPSNNI PPHELIGHQP PNLPFMASLQ NHLSRYGVAS NMGLSLTDHH HPQMGFVGNS  180
ASAIAASNGV VVDQWRLQQF PFLNGFDSNS SSAAVASSIS YPNTFHHEND QGSSGLVDIA  240
GNSRVNNQMQ PPVKMEENGS RPTTTTTTNL NVSHHQYYSW NTDMSALAAS SSTPHNLL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.2JT32
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025686165.11e-174dof zinc finger protein DOF2.4
TrEMBLA0A445E4781e-172A0A445E478_ARAHY; Uncharacterized protein
STRINGGLYMA12G06880.25e-82(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65634143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02460.17e-10Dof family protein