PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.26X49 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ARR-B | ||||||||
Protein Properties | Length: 702aa MW: 77205.6 Da PI: 5.7282 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.7 | 6.2e-29 | 221 | 274 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G +kA+Pk+il+lm+v+gLt+e+v+SHLQkYRl Aradu.26X49 221 KPRVVWSVELHRKFVAAVNQL-GLDKAVPKKILDLMNVEGLTRENVASHLQKYRL 274 79*******************.********************************8 PP | |||||||
2 | Response_reg | 40.7 | 1.2e-14 | 21 | 93 | 1 | 79 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvta 79 vl vdD+p+ +++l+++l+k +y ++ eal++l+e++ +Dl++ D++mp+mdG++ll+ e++lp+i+v++ Aradu.26X49 21 VLAVDDDPTCLKVLENLLRKCQY-------QAIEALRMLRENRnkFDLVISDVNMPDMDGFKLLELVGL-EMDLPVIMVSS 93 799********************.......455688888777777*******************87754.558******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF52172 | 4.4E-27 | 18 | 154 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:3.40.50.2300 | 5.1E-33 | 18 | 167 | No hit | No description |
SMART | SM00448 | 5.0E-23 | 19 | 145 | IPR001789 | Signal transduction response regulator, receiver domain |
PROSITE profile | PS50110 | 32.25 | 20 | 149 | IPR001789 | Signal transduction response regulator, receiver domain |
Pfam | PF00072 | 5.0E-12 | 21 | 93 | IPR001789 | Signal transduction response regulator, receiver domain |
CDD | cd00156 | 1.21E-22 | 22 | 148 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 1.7E-30 | 218 | 278 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 12.169 | 218 | 277 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 5.91E-20 | 219 | 278 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 8.6E-25 | 221 | 274 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.2E-7 | 223 | 273 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0010082 | Biological Process | regulation of root meristem growth | ||||
GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process | ||||
GO:0031537 | Biological Process | regulation of anthocyanin metabolic process | ||||
GO:0048367 | Biological Process | shoot system development | ||||
GO:0080022 | Biological Process | primary root development | ||||
GO:0080036 | Biological Process | regulation of cytokinin-activated signaling pathway | ||||
GO:0080113 | Biological Process | regulation of seed growth | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 702 aa Download sequence Send to blast |
QRWLKMTVED QIDRFPVGMR VLAVDDDPTC LKVLENLLRK CQYQAIEALR MLRENRNKFD 60 LVISDVNMPD MDGFKLLELV GLEMDLPVIM VSSLSYWCGG DQYLESHACL LSGHSDTKLV 120 MKGVTHGAVD YLLKPVRIEE LKNIWQHVVR RKNFDPRDQN KGSNDKRGPN AAGEGNQSII 180 SEDGSDQNKN LGKKRKDQTE EEEDDGEDNG EDNDDPSSQK KPRVVWSVEL HRKFVAAVNQ 240 LGLDKAVPKK ILDLMNVEGL TRENVASHLQ KYRLYLKKAT QQASMVAALG NTESYLRIGS 300 IDAYAEFCTS SGPGKIPNPA LQSYASSGIF GRLNSPANLS MRGISASTLI QPPVQPQNLN 360 STLSPLGNIQ ASIFPANQTS SLLQGIPTSI ELNQSKQNNC TTGITQVNQV SCSGFTAASG 420 FRDRRLTVGT ASNALPSAAC NSPQTHNSGA FRNQPPVRPA SLGTDSFDAG ICGPSNMLDY 480 NRCNKNWQNA EQLSKLPANP LPLCEPFNND PLPPTGINVA NTSTRIGNSP VDYSSRVAIS 540 VPLEDTRNEL QRQEGLIENI VQPSSYTTPS QRWEEHKLEY SQNMSRPFNS VNSHVSSSRV 600 TSSLGHNLNQ TNAACSNSVD ASFVGQLSGA PPSIIQCTNV DTRLKSNDAY MLELMKSRDG 660 FIQNNFGTLD DIMVPMVKRE QNEPTFIDGE MGFEAYPVGS CI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1irz_A | 2e-25 | 217 | 280 | 1 | 64 | ARR10-B |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.26X49 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015954155.1 | 0.0 | two-component response regulator ARR12 isoform X2 | ||||
TrEMBL | A0A445DY42 | 0.0 | A0A445DY42_ARAHY; Two-component response regulator | ||||
STRING | GLYMA09G14650.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF956 | 34 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-116 | response regulator 12 |