PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.1J1TJ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 375aa    MW: 42257.9 Da    PI: 6.2318
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.1J1TJgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix68.91e-21118236186
     trihelix   1 rWtkqevlaLiearremeerlrrgk................................lkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 
                  +Wt  +v++Li a+ +++++++ g                                  kk++W++vs++m+e+gf +sp+qC++k+++lnkryk++++
  Aradu.1J1TJ 118 KWTSTMVRLLIMAVYYIGDEVGGGGgssgggssgtstdpngkkkmmmnkqggglilqNKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVND 215
                  7**************88888886544456677777888888888888889999999899*************************************** PP

     trihelix  67 gekkr.tsessstcpyfdqle 86 
                    ++  +++++++ ++++ ++
  Aradu.1J1TJ 216 VLGRVtACKVVENQKLLETMD 236
                  ****9559********99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.1E-18116262No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MESNNELGSG MFSVIGSSFL GLDHNNNNNN NNNNPSQQQQ NLQHRNQPKM VQFGSSSSSS  60
HHQQINYDNN NNSSKNKHQQ GSLSDEDEQG FNNIDVDESN SNKMKNISSS ISPWQRMKWT  120
STMVRLLIMA VYYIGDEVGG GGGSSGGGSS GTSTDPNGKK KMMMNKQGGG LILQNKKGKW  180
KSVSRAMMEK GFYVSPQQCE DKFNDLNKRY KRVNDVLGRV TACKVVENQK LLETMDHLSP  240
KAKEEVRKLL NSKHLFFREM CAYHNSFGHG GDNASQSQLQ HEQGEKEKEE RCFHSSSKLK  300
IGCEEEDHND DSGDDDDDDD SENYFDEDED ELGEGGSKGH HDHHHDHNKR QKKSSSCELM  360
KELXXXXXXX XXVKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.1J1TJ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015951621.10.0putative uncharacterized protein DDB_G0287457
TrEMBLA0A445E7691e-165A0A445E769_ARAHY; Uncharacterized protein
STRINGXP_002528638.13e-88(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48203457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10040.11e-62sequence-specific DNA binding transcription factors