PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.180Q6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 485aa MW: 53137.7 Da PI: 6.0924 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.2 | 1.1e-30 | 245 | 303 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt++ gCpv+k+v+r+aed +v+++tYeg+Hnh+ Aradu.180Q6 245 ADGCQWRKYGQKMAKGNPCPRAYYRCTMStGCPVRKQVQRCAEDRSVLITTYEGQHNHP 303 7***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 7.0E-34 | 229 | 305 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.49E-28 | 237 | 305 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.182 | 239 | 305 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.8E-37 | 244 | 304 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.3E-27 | 246 | 303 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 485 aa Download sequence Send to blast |
MVHSSMELHV DTSLDLRMKN TDSNSSSMEP SETMDDKKSN DLGLLAELQH VNAENQRLRD 60 LIEELNNNYN TLHMQLINLM QQRDQNHAMK QDIEDKSKKE DMVARTFLDM GVAGFGEKDN 120 DPSQQSSDIK LGRGESKSMV ELMEHCNNNN NNNNNNNNNN NNNNNNNIVL EKDNNSNNNN 180 NKVDGGNRER NTTMVTDEGL SGWLSNKVST RLNSFRDVDQ ASETMSMIKK ARVSVRARSE 240 SSMIADGCQW RKYGQKMAKG NPCPRAYYRC TMSTGCPVRK QVQRCAEDRS VLITTYEGQH 300 NHPLPPTAKA MASTTSAAAS MLLSGSMPSA DGLINPTILE SATLPCSQNM ATLSASAPFP 360 TITLDLTQTA TNNNNNNNNY NPNSLRDLPN NQSQQLSLLT PLLAQKFMSA PNMFGHVLNG 420 DQSKIISGLQ GSIDTTTGSS FADTINAATA AITADPNFTS ALVAAISSII GNSTHHHQSS 480 NNNDA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-24 | 231 | 306 | 1 | 75 | WRKY transcription factor 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.180Q6 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020982771.1 | 0.0 | probable WRKY transcription factor 31 | ||||
TrEMBL | A0A444YF71 | 0.0 | A0A444YF71_ARAHY; Uncharacterized protein | ||||
STRING | XP_007142321.1 | 1e-147 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13913 | 12 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 1e-68 | WRKY family protein |