PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.15QQT | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||
Protein Properties | Length: 135aa MW: 16189.7 Da PI: 9.9877 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 103.5 | 2.8e-32 | 7 | 118 | 1 | 111 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 lp+G+rF+Pt+eel+v+yL++k +++ e++++++++d+y+++PwdLp + kvk +++ew+fF + ++ ++kr n +t++gyWk tgk++ v+++ Aradu.15QQT 7 LPVGYRFRPTEEELLVHYLNNKHLRNDAEIKNTVSQIDLYNFDPWDLPeQsKVKWDDQEWFFFNELKHI--KNKRCNGKTNAGYWKITGKERIVKRTg 102 799***************************999**************95257788999*****998765..56799999***********99999975 PP NAM 96 kgelvglkktLvfykg 111 ++++g+k+tLvfyk Aradu.15QQT 103 IDNVIGTKRTLVFYKR 118 5677**********53 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.31E-31 | 4 | 119 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 33.676 | 7 | 135 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.1E-18 | 8 | 129 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence Send to blast |
MTETTILPVG YRFRPTEEEL LVHYLNNKHL RNDAEIKNTV SQIDLYNFDP WDLPEQSKVK 60 WDDQEWFFFN ELKHIKNKRC NGKTNAGYWK ITGKERIVKR TGIDNVIGTK RTLVFYKRPH 120 SVKPIGFFMN IMHFI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-22 | 7 | 123 | 17 | 132 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-22 | 7 | 123 | 17 | 132 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-22 | 7 | 123 | 17 | 132 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-22 | 7 | 123 | 17 | 132 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-22 | 7 | 123 | 20 | 135 | NAC domain-containing protein 19 |
3swm_B | 3e-22 | 7 | 123 | 20 | 135 | NAC domain-containing protein 19 |
3swm_C | 3e-22 | 7 | 123 | 20 | 135 | NAC domain-containing protein 19 |
3swm_D | 3e-22 | 7 | 123 | 20 | 135 | NAC domain-containing protein 19 |
3swp_A | 3e-22 | 7 | 123 | 20 | 135 | NAC domain-containing protein 19 |
3swp_B | 3e-22 | 7 | 123 | 20 | 135 | NAC domain-containing protein 19 |
3swp_C | 3e-22 | 7 | 123 | 20 | 135 | NAC domain-containing protein 19 |
3swp_D | 3e-22 | 7 | 123 | 20 | 135 | NAC domain-containing protein 19 |
4dul_A | 3e-22 | 7 | 123 | 17 | 132 | NAC domain-containing protein 19 |
4dul_B | 3e-22 | 7 | 123 | 17 | 132 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.15QQT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016185093.1 | 3e-75 | NAC domain-containing protein 14-like | ||||
Refseq | XP_025631883.1 | 3e-75 | NAC domain-containing protein 14-like isoform X1 | ||||
TrEMBL | A0A445ACS4 | 6e-74 | A0A445ACS4_ARAHY; Uncharacterized protein | ||||
STRING | AES84466 | 1e-35 | (Medicago truncatula) | ||||
STRING | AES84627 | 3e-35 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2065 | 25 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.2 | 5e-30 | NAC 014 |