PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.0KI78
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family AP2
Protein Properties Length: 417aa    MW: 46189.4 Da    PI: 8.5034
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.0KI78genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.61e-1066120155
          AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  s y+GV+  +++gr++A+++d  ++n+ ++k+   g ++ +e Aa+a++ a++k++g
  Aradu.0KI78  66 SIYRGVT--RWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 120
                  579***7..48**********6666777775555599******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541715.1E-1266129IPR016177DNA-binding domain
PfamPF008476.2E-567120IPR001471AP2/ERF domain
PROSITE profilePS5103215.35667128IPR001471AP2/ERF domain
SMARTSM003803.3E-1467134IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.5E-1067129IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MASSSSDPGK SDAGGGAADT SEAVVAAAND QLLLYRGLKK AKKERGCTAK ERISKMPPCA  60
AGKRSSIYRG VTRWTGRYEA HLWDKSTWNQ NQNKKGKQGA YDDEEAAARA YDLAALKYWG  120
PGTLINFPVT DYTRDLDEMQ NVSREEYLAS LRRKSSGFSR GISKYRALSS RWEPYGRIAG  180
SDYFNSMQYG DDSAAESDYM SGFCIERKID LTSHIKWWAS NKNRQPDSGT RLSEEKKHGF  240
AGDVCSELKT LEQKVQPTEP YQMPKLGQPH NEKKHKSSSG SALSILSQSA AYKSLQEKAA  300
KRQENSTEND ENENKNIVNK LDHGKAVEKS SNHEDGNDRL DIAMGMSGAL SLQRNVYPLT  360
PFLSAPLLTA YNSVDPLGDP VLWTSIVPIL PAGMISRTAE VTKTETSSTY TMFQPEE
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.0KI78
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015969152.10.0AP2-like ethylene-responsive transcription factor At2g41710
RefseqXP_016205013.10.0AP2-like ethylene-responsive transcription factor At2g41710
RefseqXP_025604382.10.0AP2-like ethylene-responsive transcription factor At2g41710
RefseqXP_025660659.10.0AP2-like ethylene-responsive transcription factor At2g41710
SwissprotQ8GWK21e-156AP2L4_ARATH; AP2-like ethylene-responsive transcription factor At2g41710
TrEMBLA0A445CLQ10.0A0A445CLQ1_ARAHY; Uncharacterized protein
STRINGXP_004493481.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60072936
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-150AP2 family protein