PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe7G393500.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | CPP | ||||||||
Protein Properties | Length: 1055aa MW: 116447 Da PI: 7.9638 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 46.7 | 6.3e-15 | 633 | 671 | 3 | 41 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnC++skClk+YCeCfaag +C+e C C++C+Nk + Aqcoe7G393500.1.p 633 CKRCNCRRSKCLKLYCECFAAGIYCAEPCACQECFNKPQ 671 89**********************************976 PP | |||||||
2 | TCR | 50.9 | 3e-16 | 722 | 760 | 1 | 39 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC+++g+ Cs C+Ce+CkN Aqcoe7G393500.1.p 722 RHKRGCNCKKSMCLKKYCECYQSGVGCSAGCRCEGCKNA 760 589***********************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM01114 | 2.2E-15 | 631 | 672 | IPR033467 | Tesmin/TSO1-like CXC domain |
PROSITE profile | PS51634 | 35.61 | 632 | 762 | IPR005172 | CRC domain |
Pfam | PF03638 | 3.4E-11 | 634 | 669 | IPR005172 | CRC domain |
SMART | SM01114 | 1.1E-16 | 722 | 763 | IPR033467 | Tesmin/TSO1-like CXC domain |
Pfam | PF03638 | 1.1E-11 | 724 | 760 | IPR005172 | CRC domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 1055 aa Download sequence Send to blast |
MDSPETNKIV TSTSTSSSTT SSPVVQLCFH VQFDGLFRLI CVDSSAFYVR NVNSVLFDLD 60 RWIGSLLFVG NVVVGVKLYL VTSQHSYLVM LKFKSFGDTD QNSYRHFALT SLMESPFFNY 120 LRTLSPIKPV KAAHVAQGFP ELSIPTPPPV FTSPRLNPQS ETIFLNRSKH FHSSNKKLSI 180 GHEGNRDRGT DISERPISRL TVRLVSCSQK GRDSKCSAQV QPSSPSQFVD EFLADPVEVV 240 RTNSSDPDVT CLNHVDDTPE VQLGCIRSKE TTVKENNVND ELLKYVENGS DVQIKSSEQT 300 EVDLQGRSVA VFKTGKMENG ESQSVVYQDL ASEDVNDINF PNSCIKPVSG AQNSPHGKAR 360 SAEGSQEATC DNNNQVLSEI MQMGEYAGVA SNESAETKIV DPEETGQNQR VLRRRCLQFE 420 ASVAHRKSIF SNQGFSSPAI ISRCSRLPAN STEMEMLESS ELDCGISNNI CTANSSQPMA 480 SKPSPCAAKT VETHNDKLNR SVRNGGNPSI KAPLPSGIGL HLNSIVNTAA MGCTASLSRK 540 PSENDYPSAQ REKPPSVPNQ YLPTESKSFS VPASVLGKFS VKRLGYELET QSIADNSATF 600 QFPNDNADQI QEFNQLSPQK KRKRTFTNED EGCKRCNCRR SKCLKLYCEC FAAGIYCAEP 660 CACQECFNKP QYEDKVLETR KQIESRNPLA FAPKIVRRVT DSPANSIMLQ EENKKVTPAS 720 ARHKRGCNCK KSMCLKKYCE CYQSGVGCSA GCRCEGCKNA FGIKEGYGEV SERLSRKVDG 780 ESWEDNSDGK LAMVTRSNFI EQEHCHPHNN LTPLTPSLQY PNQGKDVHTS RLPGRRFLPS 840 PESETNHLSL YAKSPGSTRY VFTHERRSKM GDGNLDIVFD QEVEFSTTGR IDQFSPRWDG 900 FEDICDLTPL PQTSSKAKAI LSPSNSRDSG KVSQIQLQGS VRLSGSLRWR SSPITPTPQL 960 GESKLRQEPD SDVGCAILED DTPDILKDTH TPIKTVKASS PNQKRVSPPH NHLHNLRSSP 1020 SPGLKSGRKF VLQSISSFPP LTPYSDPKDC SSKK* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5fd3_A | 5e-16 | 634 | 759 | 12 | 120 | Protein lin-54 homolog |
5fd3_B | 5e-16 | 634 | 759 | 12 | 120 | Protein lin-54 homolog |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 619 | 624 | KKRKRT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010254334.1 | 0.0 | PREDICTED: protein tesmin/TSO1-like CXC 4 | ||||
TrEMBL | A0A2G5DG64 | 0.0 | A0A2G5DG64_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_020_00165.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14770.1 | 1e-67 | TESMIN/TSO1-like CXC 2 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe7G393500.1.p |