PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G358700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 471aa    MW: 51976.3 Da    PI: 6.8788
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G358700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.33.2e-28162218359
                        -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        D+ynWrKYGqK+vk+++ +rsYYrCt+ +C++kkkver+++  +v+ei+Y+g H h+
  Aqcoe7G358700.1.p 162 DEYNWRKYGQKPVKNNNSSRSYYRCTHVDCHAKKKVERCDQSDRVIEIVYKGGHSHD 218
                        9*******************************************************7 PP
2WRKY95.92.9e-30335390359
                        -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        Dgy+WrKYGqK+vkg+ +prsYY+CtsagCpv+k+ve++  d +++ i Yeg+H+h+
  Aqcoe7G358700.1.p 335 DGYRWRKYGQKMVKGNSNPRSYYKCTSAGCPVRKHVEKAM-DDTTIMISYEGKHDHD 390
                        9***************************************.7777889********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.1E-26157220IPR003657WRKY domain
SuperFamilySSF1182901.07E-23159220IPR003657WRKY domain
SMARTSM007741.1E-28160219IPR003657WRKY domain
PfamPF031062.3E-21162217IPR003657WRKY domain
PROSITE profilePS5081122.435162220IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.0E-31318392IPR003657WRKY domain
PROSITE profilePS5081129.597328392IPR003657WRKY domain
SuperFamilySSF1182901.44E-24329392IPR003657WRKY domain
SMARTSM007741.9E-32333391IPR003657WRKY domain
PfamPF031062.9E-23335389IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MEKNQSLKLP KEEEEEREND KVVVEEENKV SEEVSETLVI ASNSEELDFK PTIISTSVTS  60
LASSELKIEQ FGSSSPKVME CVIAQGQGQM QGQAEYSYSS TKLLPVRIQQ SLSSSITPTS  120
LCQSSPPQHQ DNNSCTLDVK QQNSSQQILE PAHALVKTPS LDEYNWRKYG QKPVKNNNSS  180
RSYYRCTHVD CHAKKKVERC DQSDRVIEIV YKGGHSHDPP QKIRRTEARI CPSTVGAISS  240
PEPGEVSVAI DCPPTNLDSP STPRRKLKHA SPEQKLHSSK DCASNDIVKN EASFDISSAK  300
RRFKGQSVED SLYKTTVKEP KIVVQASGDV GVSGDGYRWR KYGQKMVKGN SNPRSYYKCT  360
SAGCPVRKHV EKAMDDTTIM ISYEGKHDHD MPVPKKNQDL PVAALLSAAT SMNNAQLQNC  420
EALISPESST QVSMDVEREV ASEKISELGP EKALESARTL LSIGIELRPC *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-25321392274WRKY transcription factor 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010265585.11e-126PREDICTED: probable WRKY transcription factor 32
TrEMBLA0A2G5DQS60.0A0A2G5DQS6_AQUCA; Uncharacterized protein
STRINGAquca_016_00233.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.12e-73WRKY DNA-binding protein 32