PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe7G349000.5.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Dof

Protein Properties

Length: 677aa MW: 77601.5 Da PI: 6.5036

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe7G349000.5.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	80.5	1.9e-25	36	91	5	60
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +lkcprC+stntkf yy n + sqPr+fCk C r W G lr++PvG g rk+++ Aqcoe7G349000.5.p 36 SLKCPRCESTNTKFFYYQNQQKSQPRHFCKDCLRSWSVNGKLRDIPVGRGERKRRQ 91 689**************************************************986 PP
2	zf-Dof	56.6	5.3e-18	103	154	5	57
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrk 57 l+cp C+stntkf yy n s+P +fC Crr Wt GG+ r + + ggr++ Aqcoe7G349000.5.p 103 VLQCPHCESTNTKFFYYQNQDKSKPFHFCNDCRRQWTVGGS-RLMALSGGRKR 154 579*************************************9.66666666544 PP
3	zf-Dof	50.1	5.8e-16	170	209	4	43
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkG 43 alkc+rC+stntkf yy n s+P +fC C yWt G Aqcoe7G349000.5.p 170 VALKCSRCESTNTKFAYYQNQIRSKPVHFCNDCLHYWTVG 209 5789**********************************98 PP
4	zf-Dof	72.3	6.9e-23	230	286	5	61
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 al+cprC+s +tkf yy ++ s+P +fCk+Crr+Wt GG lr Ggg+r++++ Aqcoe7G349000.5.p 230 ALECPRCESIDTKFVYYQYHNESKPVHFCKNCRRHWTVGGLLRTNLYGGGQRRKRQL 286 689**************************************9999*9999875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-14	36	91	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.5E-23	36	91	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	22.331	37	91	IPR003851	Zinc finger, Dof-type
SuperFamily	SSF57783	9.64E-5	95	139	No hit	No description
ProDom	PD007478	2.0E-9	103	154	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.7E-17	103	154	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	18.054	104	158	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	5.0E-9	159	209	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.3E-13	171	209	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	15.258	172	226	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.0E-20	230	285	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-13	231	284	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	21.12	231	285	IPR003851	Zinc finger, Dof-type
Pfam	PF05266	3.6E-42	487	659	IPR007930	Protein of unknown function DUF724

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence Send to blast
MDSSRVISFQ QLGGMESMNH VSMDVEDGQA LIMNMSLKCP RCESTNTKFF YYQNQQKSQP 60 RHFCKDCLRS WSVNGKLRDI PVGRGERKRR QPEIFVPDHA RVVLQCPHCE STNTKFFYYQ 120 NQDKSKPFHF CNDCRRQWTV GGSRLMALSG GRKRRLPESS MANQASMSQV ALKCSRCEST 180 NTKFAYYQNQ IRSKPVHFCN DCLHYWTVGE RKIQQPEISM ANEASMCQVA LECPRCESID 240 TKFVYYQYHN ESKPVHFCKN CRRHWTVGGL LRTNLYGGGQ RRKRQLKDPD LEASVEGPDS 300 QASSKESTEV VQTECTQDIE HRHLSSCLLE SIVKDNRGQE KRPQLEGSGE MASVRGSKSN 360 VTNNEALEVI HAECSKTFSC FTQEHQPVSV CPENFNSHME KDSEGFHFDD EVTPNEEVNL 420 SDASRSLETL ESSNVVENSS WMKKCNTSND FCIDARENEM TQHISVDVAT TTSTQPSLEP 480 SPLESGLPFI KSSFMWPQFE SMEVFRSMPQ QPHFDPLKEQ DEYLREGAAI GLMVSFTKLI 540 EVTRKAQLDD SKCMFDVKLD ALQILEGYGF TVEPIRNQLV KLLHINERYE QHNCMLKTTT 600 REVTEGLESI ALLDKDLQLL KEKKEKEAFR VAELQRTSEQ IEESILAARL NFDTLVAAPV 660 EKKLYYEGNR FTMTCF*

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence Send to blast

MDSSRVISFQ QLGGMESMNH VSMDVEDGQA LIMNMSLKCP RCESTNTKFF YYQNQQKSQP  60
RHFCKDCLRS WSVNGKLRDI PVGRGERKRR QPEIFVPDHA RVVLQCPHCE STNTKFFYYQ  120
NQDKSKPFHF CNDCRRQWTV GGSRLMALSG GRKRRLPESS MANQASMSQV ALKCSRCEST  180
NTKFAYYQNQ IRSKPVHFCN DCLHYWTVGE RKIQQPEISM ANEASMCQVA LECPRCESID  240
TKFVYYQYHN ESKPVHFCKN CRRHWTVGGL LRTNLYGGGQ RRKRQLKDPD LEASVEGPDS  300
QASSKESTEV VQTECTQDIE HRHLSSCLLE SIVKDNRGQE KRPQLEGSGE MASVRGSKSN  360
VTNNEALEVI HAECSKTFSC FTQEHQPVSV CPENFNSHME KDSEGFHFDD EVTPNEEVNL  420
SDASRSLETL ESSNVVENSS WMKKCNTSND FCIDARENEM TQHISVDVAT TTSTQPSLEP  480
SPLESGLPFI KSSFMWPQFE SMEVFRSMPQ QPHFDPLKEQ DEYLREGAAI GLMVSFTKLI  540
EVTRKAQLDD SKCMFDVKLD ALQILEGYGF TVEPIRNQLV KLLHINERYE QHNCMLKTTT  600
REVTEGLESI ALLDKDLQLL KEKKEKEAFR VAELQRTSEQ IEESILAARL NFDTLVAAPV  660
EKKLYYEGNR FTMTCF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	85	90	ERKRRQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5DR35	0.0	A0A2G5DR35_AQUCA; Uncharacterized protein
STRING	Aquca_016_00317.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	3e-19	DOF zinc finger protein 1

Link Out ? help Back to Top
Phytozome	Aqcoe7G349000.5.p