PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe7G349000.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | Dof | ||||||||
Protein Properties | Length: 620aa MW: 71059.3 Da PI: 6.5504 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 80.7 | 1.7e-25 | 36 | 91 | 5 | 60 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +lkcprC+stntkf yy n + sqPr+fCk C r W G lr++PvG g rk+++ Aqcoe7G349000.2.p 36 SLKCPRCESTNTKFFYYQNQQKSQPRHFCKDCLRSWSVNGKLRDIPVGRGERKRRQ 91 689**************************************************986 PP | |||||||
2 | zf-Dof | 56.8 | 4.8e-18 | 103 | 154 | 5 | 57 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrk 57 l+cp C+stntkf yy n s+P +fC Crr Wt GG+ r + + ggr++ Aqcoe7G349000.2.p 103 VLQCPHCESTNTKFFYYQNQDKSKPFHFCNDCRRQWTVGGS-RLMALSGGRKR 154 579*************************************9.66666666544 PP | |||||||
3 | zf-Dof | 50.2 | 5.2e-16 | 170 | 209 | 4 | 43 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkG 43 alkc+rC+stntkf yy n s+P +fC C yWt G Aqcoe7G349000.2.p 170 VALKCSRCESTNTKFAYYQNQIRSKPVHFCNDCLHYWTVG 209 5789**********************************98 PP | |||||||
4 | zf-Dof | 72.4 | 6.1e-23 | 230 | 286 | 5 | 61 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 al+cprC+s +tkf yy ++ s+P +fCk+Crr+Wt GG lr Ggg+r++++ Aqcoe7G349000.2.p 230 ALECPRCESIDTKFVYYQYHNESKPVHFCKNCRRHWTVGGLLRTNLYGGGQRRKRQL 286 689****************************************9999***9999875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-14 | 36 | 91 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.2E-23 | 36 | 91 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 22.331 | 37 | 91 | IPR003851 | Zinc finger, Dof-type |
SuperFamily | SSF57783 | 9.07E-5 | 95 | 139 | No hit | No description |
ProDom | PD007478 | 1.0E-9 | 103 | 154 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.4E-17 | 103 | 154 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 18.054 | 104 | 158 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 4.0E-9 | 159 | 209 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 3.0E-13 | 171 | 209 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 15.258 | 172 | 226 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 3.5E-20 | 230 | 285 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 6.0E-14 | 231 | 284 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 21.12 | 231 | 285 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF05266 | 2.9E-42 | 438 | 610 | IPR007930 | Protein of unknown function DUF724 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 620 aa Download sequence Send to blast |
MDSSRVISFQ QLGGMESMNH VSMDVEDGQA LIMNMSLKCP RCESTNTKFF YYQNQQKSQP 60 RHFCKDCLRS WSVNGKLRDI PVGRGERKRR QPEIFVPDHA RVVLQCPHCE STNTKFFYYQ 120 NQDKSKPFHF CNDCRRQWTV GGSRLMALSG GRKRRLPESS MANQASMSQV ALKCSRCEST 180 NTKFAYYQNQ IRSKPVHFCN DCLHYWTVGE RKIQQPEISM ANEASMCQVA LECPRCESID 240 TKFVYYQYHN ESKPVHFCKN CRRHWTVGGL LRTNLYGGGQ RRKRQLKDPD LEASVEGPDS 300 QASSKESTEV VQTECTQDIE HRHLSSCLLE SIVKDNRGQE KRPQLEGSGE MASVRGFHFD 360 DEVTPNEEVN LSDASRSLET LESSNVVENS SWMKKCNTSN DFCIDARENE MTQHISVDVA 420 TTTSTQPSLE PSPLESGLPF IKSSFMWPQF ESMEVFRSMP QQPHFDPLKE QDEYLREGAA 480 IGLMVSFTKL IEVTRKAQLD DSKCMFDVKL DALQILEGYG FTVEPIRNQL VKLLHINERY 540 EQHNCMLKTT TREVTEGLES IALLDKDLQL LKEKKEKEAF RVAELQRTSE QIEESILAAR 600 LNFDTLVAAP GEYSLIIMD* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 85 | 90 | ERKRRQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2G5DR35 | 0.0 | A0A2G5DR35_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_016_00317.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 2e-19 | DOF zinc finger protein 1 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe7G349000.2.p |