PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G348800.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Dof
Protein Properties Length: 559aa    MW: 63723 Da    PI: 7.812
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G348800.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof64.91.4e-203794560
             zf-Dof  5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWt..kGGalrnvPvGggrrknkk 60
                       a kcprC+stntkf yy n +  +Pry+C  Cr  Wt  + G +r+vPvGgg  + k+
  Aqcoe7G348800.2.p 37 ACKCPRCQSTNTKFSYYQNQQELKPRYYCNDCRENWTvnANGGMRDVPVGGGLEEIKR 94
                       679*********************************9555799*********877665 PP
2zf-Dof43.56.7e-14108152650
             zf-Dof   6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvP 50 
                        l+cprC st+tkf  y   + s+P + Ck+Crr Wt    lr  P
  Aqcoe7G348800.2.p 108 LECPRCGSTHTKFSNYSQRNKSKPIHSCKNCRRKWTVSARLRASP 152
                        79***********************************99999766 PP
3zf-Dof44.14.2e-14173216447
             zf-Dof   4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalr 47 
                         alkcprC+stnt f      +  +P  fCk+CrryWt G ++r
  Aqcoe7G348800.2.p 173 VALKCPRCESTNTNFYGRSVQNEPKPVRFCKNCRRYWTVGASVR 216
                        5789***********999999999*****************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-113594IPR003851Zinc finger, Dof-type
PfamPF027015.2E-193893IPR003851Zinc finger, Dof-type
PROSITE profilePS5088417.6163894IPR003851Zinc finger, Dof-type
PfamPF027018.3E-13108152IPR003851Zinc finger, Dof-type
ProDomPD0074782.0E-7108152IPR003851Zinc finger, Dof-type
PROSITE profilePS5088415.65108162IPR003851Zinc finger, Dof-type
SuperFamilySSF1440204.58E-5110143IPR024064FdhE-like
ProDomPD0074783.0E-8163217IPR003851Zinc finger, Dof-type
SuperFamilySSF1440204.58E-5172210IPR024064FdhE-like
PfamPF027013.3E-10174216IPR003851Zinc finger, Dof-type
PfamPF052663.7E-43381553IPR007930Protein of unknown function DUF724
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 559 aa     Download sequence    Send to blast
MNTSNIFSLP QLGGMEIMNF VARDVSENDQ AMIMKVACKC PRCQSTNTKF SYYQNQQELK  60
PRYYCNDCRE NWTVNANGGM RDVPVGGGLE EIKRRQPDNS APHTLVTLEC PRCGSTHTKF  120
SNYSQRNKSK PIHSCKNCRR KWTVSARLRA SPGEWKKWQP ELSMAEQASM SQVALKCPRC  180
ESTNTNFYGR SVQNEPKPVR FCKNCRRYWT VGASVRTKRE LKDSGLQASV EGQEKTRQSK  240
GSDEMASVRD FESNVASNEA LEVIHTEYST SFSYSAQKHQ PVSVRLEKFS SHLDKDIEGF  300
LFDDEVTPNE EVNLSDASRS SKSPESSNVV ENSSCVKKCN MSSYFCINAR ENEMAEHISV  360
DAATTTSRQP SPEPLPLESG LPFIKSSFMW QQFESMEVFR SLPQQPHFNP LKEQEVCFRE  420
GDAIGLMLNF TKLVEDTRRV QHDDSRSMLD VKLDALQILE AYGFTVEPIR NKLVKLLQIK  480
ERYEQHNCML KTTIREVTEG LESIALLDKD LQLLKEKKEK ETFRVAELQR TSEQIKESIQ  540
AARSNFDTLV AAPCWSIK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DR350.0A0A2G5DR35_AQUCA; Uncharacterized protein
STRINGAquca_016_00317.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21050.11e-15Dof-type zinc finger domain-containing protein