PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe7G346600.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | NAC | ||||||||
Protein Properties | Length: 241aa MW: 27218.2 Da PI: 10.2269 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 86.2 | 6.3e-27 | 10 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratk....sgy.... 82 l+pGfrF+Ptdeel+ +yL+++v +k+++ + vi+++d++ + P +L+ k + ++ + yfF++r +k+++g+r++r+t +g+ Aqcoe7G346600.1.p 10 LAPGFRFRPTDEELIAYYLRPRVFNKPIPYNIVIADADVFGSLPDELKdKaVFVPGDGNFYFFAERMRKHPNGNRPKRSTVickeEGRvelk 101 579***************************999**************8542333477799******************85555554434444 PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 W+ t + +++ k+g+++g+++ L + + ++t+W +he+++ Aqcoe7G346600.1.p 102 WNGTQSPVQIKLKNGKVIGTRTLLKLM----VNKKSTKWRIHEFQI 143 **************************9....333579*******87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.02E-29 | 4 | 172 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 31.57 | 10 | 172 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.7E-15 | 12 | 143 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MEFNVNNLRL APGFRFRPTD EELIAYYLRP RVFNKPIPYN IVIADADVFG SLPDELKDKA 60 VFVPGDGNFY FFAERMRKHP NGNRPKRSTV ICKEEGRVEL KWNGTQSPVQ IKLKNGKVIG 120 TRTLLKLMVN KKSTKWRIHE FQIEKSCLPP SVKDDQRKKG YLDVVLCRLF KKEKKKTNDN 180 TISSMSTMPL EEQPLGYYLP NNNTGGSQIP YQHQPQYQVS TSASAPASSV SASASAPGFT 240 * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 6e-18 | 5 | 173 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 6e-18 | 5 | 173 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 6e-18 | 5 | 173 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 6e-18 | 5 | 173 | 12 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 6e-18 | 5 | 173 | 15 | 169 | NAC domain-containing protein 19 |
3swm_B | 6e-18 | 5 | 173 | 15 | 169 | NAC domain-containing protein 19 |
3swm_C | 6e-18 | 5 | 173 | 15 | 169 | NAC domain-containing protein 19 |
3swm_D | 6e-18 | 5 | 173 | 15 | 169 | NAC domain-containing protein 19 |
3swp_A | 6e-18 | 5 | 173 | 15 | 169 | NAC domain-containing protein 19 |
3swp_B | 6e-18 | 5 | 173 | 15 | 169 | NAC domain-containing protein 19 |
3swp_C | 6e-18 | 5 | 173 | 15 | 169 | NAC domain-containing protein 19 |
3swp_D | 6e-18 | 5 | 173 | 15 | 169 | NAC domain-containing protein 19 |
4dul_A | 6e-18 | 5 | 173 | 12 | 166 | NAC domain-containing protein 19 |
4dul_B | 6e-18 | 5 | 173 | 12 | 166 | NAC domain-containing protein 19 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2G5DR90 | 1e-108 | A0A2G5DR90_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_016_00364.1 | 1e-109 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 3e-27 | NAC domain containing protein 47 |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe7G346600.1.p |