PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G252700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Trihelix
Protein Properties Length: 256aa    MW: 29395.1 Da    PI: 8.6071
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G252700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix44.34.7e-1441109270
           trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                        W+ +e l L++ ++++e+++ ++ +  ++W  vs+++ + g+ rs +qC+  w+ l  +y++ik++e++
  Aqcoe7G252700.1.p  41 WSLHEMLILVNQVSSIESDFMKSMSSYQKWNLVSSNCNSLGVVRSLNQCRRQWDLLLDEYQRIKDWESQ 109
                        *******************************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.1914097IPR017877Myb-like domain
PfamPF138377.8E-1040112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009506Cellular Componentplasmodesma
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MDLQTLLTPI KRKRISSDSK PTTNKRSNRN RNSRSQIFPN WSLHEMLILV NQVSSIESDF  60
MKSMSSYQKW NLVSSNCNSL GVVRSLNQCR RQWDLLLDEY QRIKDWESQS GISYWFLDND  120
SKLELGLPKS FEKQLFLFVD DNVKAQEEQL LADSGNSDPD FNVAKDTGSK KKRRCRGPQE  180
SRNEEEQQMA IKLREQADRV HAILKGDTEC NSYSDLKGPG EIKAEFRRWQ GKELIKVLGS  240
LVGTIDKLSD LVQDG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169173KKKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5D0I70.0A0A2G5D0I7_AQUCA; Uncharacterized protein
STRINGAquca_031_00042.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.11e-34sequence-specific DNA binding transcription factors